TCONS_00009151-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009151-protein
Unique NameTCONS_00009151-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009151-protein ID=TCONS_00009151-protein|Name=TCONS_00009151-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
LYFLGKCIGFRSVTMTTSKEDNNKQAIIYLSLNEEQLLAEQVQKHPILYN
KYTKGHLRDKDELKNEAWADVADNLHYVTDATQAQKLFFVLKKKFLRKRR
EVKDAYRGGSQTTIAKAEKAYRQYEFLHWLSEYLQERETRRCNTTSFSNS
WSNGADKKDTISDHDEGSLYGHDMDEIPTMVPKRSLATPSSEISTNSVMI
DTKIGDSLDSFKSSTQTSTSQQKHGSISPTGSYKYFQMSEIREGTQRSVK
NTAPIDAVKFRSQADTTRPELLGGPSSTSGAPQKIHSPGNKRKLDSPQQD
KDEIFCKGLVLDLKELPLYERLHAKQEMRNVLFKYQIAVMEKQQNQEEDQ
R
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005126XLOC_005126Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009151TCONS_00009151Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006578MADF domainSMARTSM00595118neu2coord: 37..135
e-value: 0.007
score: 25.6
IPR006578MADF domainPFAMPF10545MADF_DNA_bdgcoord: 38..127
e-value: 4.9E-8
score: 33.1
IPR006578MADF domainPROSITEPS51029MADFcoord: 37..135
score: 9.663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..231
IPR004210BESS motifPROSITEPS51031BESScoord: 299..338
score: 10.859

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009151-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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