TCONS_00009187-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009187-protein
Unique Name	TCONS_00009187-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	496

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009187-protein ID=TCONS_00009187-protein|Name=TCONS_00009187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
EGISYSRIEASKMAAPIFIATLCFMWIVYIWETYLSFRQYKVYRDTDDVP
EELEDYIDEETFEKSRSYQLDKSRFGFIAGLYSQIESTVILWFFCIPLLW
KFSGDVNAMIGFDETHEIKRSMLFMVFASIFSTITSLPWSLYSTFVIEEK
HGFNKQTLGFFFKDLVKKLVVSTLITLPITAAIIWIVKWGGDYFFVYAWL
FSLTVSLFIISIYHDYIAPLFDRFITLPEGELRESIEALAKRIEFPLTKI
FVVEGSKRSSHSNAYFFGFYKKKVIVLFDTLLKVSPFEEEKRLKEEEEKK
KKIEEEGEGNQQDETEEKDGESKEKNESSEGGNTEKKKEEKGCSDEEILA
ILGHELGHWKLNHILKNLAISQVNLLLSFFVFGLLMNNSMLYESFGFYNE
MPTLIGLMIIFQFVFSPYNELMGFLMTVLSRRFEFQADEFGKSLGYGVKL
QSALIKLHKENLGFPAADKLYSAYHYSHPPLLERLKALQTSNKKKE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005158	XLOC_005158	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009187	TCONS_00009187	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032456	Peptidase_M48_N
IPR001915	Peptidase_M48

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 293..313
None	No IPR available	GENE3D	3.30.2010.10		coord: 222..362 e-value: 7.4E-23 score: 80.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..340
IPR032456	CAAX prenyl protease 1, N-terminal	PFAM	PF16491	Peptidase_M48_N	coord: 39..222 e-value: 6.8E-70 score: 234.6
IPR001915	Peptidase M48	PFAM	PF01435	Peptidase_M48	coord: 227..490 e-value: 1.8E-53 score: 181.1

Blast

[Close]

BLAST of TCONS_00009187-protein vs. Swiss-Prot (Human)
Match: FACE1 (CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2)

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 271/474 (57.17%), Postives = 348/474 (73.42%), Query Frame = 0

Query:   17 IFIATLCFMWIVYIWETYLSFRQYKVYRDTDDVPEELEDYIDEETFEKSRSYQLDKSRFGFIAGLYSQIESTVILWFFCIPLLWKFSGDVNAMIGFDETHEIKRSMLFMVFASIFSTITSLPWSLYSTFVIEEKHGFNKQTLGFFFKDLVKKLVVSTLITLPITAAIIWIVKWGGDYFFVYAWLFSLTVSLFIISIYHDYIAPLFDRFITLPEGELRESIEALAKRIEFPLTKIFVVEGSKRSSHSNAYFFGFYKKKVIVLFDTLLKVSPFEEEKRLKEEEEKKKKIEEEGEGNQQDETEEKDGESKEKNESSEGGNTEKKKEEKGCSDEEILAILGHELGHWKLNHILKNLAISQVNLLLSFFVFGLLMNNSMLYESFGFYNEMPTLIGLMIIFQFVFSPYNELMGFLMTVLSRRFEFQADEFGKSLGYGVKLQSALIKLHKENLGFPAADKLYSAYHYSHPPLLERLKALQT 490
            IF A L F W VY+WET+L+ RQ ++Y+ T  VP EL   +D ETFEKSR YQLDKS F F +GLYS+ E T+IL F  IP LW+ SG      GF   +EI +S++F++ A++FS +T LPWSLY+TFVIEEKHGFN+QTLGFF KD +KK VV+  I LP+++ +++I+K GGDYFF+YAWLF+L VSL +++IY DYIAPLFD+F  LPEG+L+E IE +AK I+FPLTK++VVEGSKRSSHSNAYF+GF+K K IVLFDTL           L+E     K I+E+     ++E E    E K K           K +++GC +EE+LA+LGHELGHWKL H +KN+ ISQ+N  L FF+F +L+    L+ +FGFY+  PTLIGL+IIFQF+FSPYNE++ F +TVLSRRFEFQAD F K LG    L SALIKL+K+NLGFP +D L+S +HYSHPPLLERL+AL+T
Sbjct:   19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALTGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTL-----------LEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAK----------VKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKDNLGFPVSDWLFSMWHYSHPPLLERLQALKT 471

The following BLAST results are available for this feature:

BLAST of TCONS_00009187-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FACE1	0.000e+0	57.17	CAAX prenyl protease 1 homolog OS=Homo sapiens GN=...	[more]

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TCONS_00009187-protein (polypeptide) - C. hemisphaerica