TCONS_00009208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009208-protein
Unique NameTCONS_00009208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009208-protein ID=TCONS_00009208-protein|Name=TCONS_00009208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MKKKNTGQFRNTVWDPLLITSQILSVQSVFYASYGLLTFIVCSVAGLPIS
VGQMFDSKIIGAVSYDGKLQIMVFLINSLICALSIWFIVQRAKQCLDFTV
TAHFVHFLLCCFIVGFPKSGIWWVMVMVSVIITALVSEYLCMRYEMKAIP
VTVSGVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005170XLOC_005170Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009208TCONS_00009208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019185Integral_membrane_SYS1-rel
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019185Integral membrane protein SYS1-relatedPFAMPF09801SYS1coord: 9..150
e-value: 1.9E-41
score: 141.5

Blast
[Close]
BLAST of TCONS_00009208-protein vs. Swiss-Prot (Human)
Match: SYS1 (Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.459e-44
Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 0 
Query:    6 TGQFRNTVWDPLLITSQILSVQSVFYASYGLLTFIVCSVAGLPISVGQMFDSKIIGAVSYDGKLQIMVFLINSLICALSIWFIVQRAKQCLDFTVTAHFVHFLLCCFIVG-FPKSGIWWVMVMVSVIITALVSEYLCMRYEMKAIPVTVSGVS 157
             GQFR+ VWDPLLI SQI+ +Q+V+Y S GL   +V  +     S+ QMFD++I+G  +  G+L +M F++N+L CAL + + ++R KQCLDFTVT HF H L C F    FP +  WW++  V + + A++ EYLCMR E+K IP+  +  S
Sbjct:    2 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKS 154
The following BLAST results are available for this feature:
BLAST of TCONS_00009208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYS11.459e-4445.75Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 ... [more]
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