TCONS_00009345-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009345-protein
Unique NameTCONS_00009345-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length893

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009345-protein ID=TCONS_00009345-protein|Name=TCONS_00009345-protein|organism=Clytia hemisphaerica|type=polypeptide|length=893bp
MVKSNEELYTKGTRIWVPDPDQVWIGAELLEDLKDDQLELTLEDGREVVL
DLKVTKSLPPLRNPDILVGSDDLTTLSYLHEAAVLYNLQERFLNSQCIYT
YCGIVLVALNPYQSVPLYGQEIISAYSGKSSHEIDPHIYAVAENAYRSML
NLNQNQSIIVSGESGAGKTVSAKYAMRYFANVGGSIAESTVEKKVLASNP
IMEAIGNAKTIRNDNSSRFGKYIEINFDTSNSIIGANMRTYLLEKSRVVF
QAANERNYHIFHQLCACHDHPDLQDLQLGESTEFYYTQQGENPTIPGVDD
AKDFQETCEALSLLGIYSEQQRMIWRILAAILHLGNVSIEVTSKIKDECG
IRQEDVHLMMVATLLGIDKNQLRKWLCARKIVATGDVYVKPLTFAEANNG
RDALAKHIYSMLFKWIVEHINSSLAIATQRKSFIGVLDIYGFETFEVNSF
EQFCINYANEKLQQQFNMHVFKLEQEEYIREQITWSFIDFYDNQSCIDLI
ETKLGILDLLDEECRMPKGSDSAWALKLYKQHLKTSDHFIKPRMSEKAFI
IRHYADDVIYDCDGFVEKNRDLINEEHINLLCASEYELVGELFRSDNTAS
THAPRKRTTSRVGKSAPKGKKTVGSEFRDSLKMLMDTLNSTSPHYVRCIK
SNDGKEAFQLDLHRCVQQLRACGVLETIRISAAGYPSRWTYNEFFDRYRM
LIPWKSINWDSLNDTCNTILSAHIDDDDKFQLGKTKIFFRAGAVAYLERL
RSDLLKRSCITIQKNIKCWLACRKFQRMRKSAIAIQCFVRVYQAKRLVQS
LRERRATIRIQKIWRGHSTRXLYARDARPLGYKRSGVVIPPGNGSLKSEN
KSFKFKHKLEEFWRVVDYVLKSNKSNRSSYKNIGGCTKRERNI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005236XLOC_005236Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009345TCONS_00009345Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001609Myosin_head_motor_dom
IPR000048IQ_motif_EF-hand-BS
IPR004009Myosin_N
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003774motor activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016459 myosin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001609Myosin head, motor domainPRINTSPR00193MYOSINHEAVYcoord: 200..227
score: 73.98
coord: 486..514
score: 40.13
coord: 99..118
score: 50.56
coord: 155..180
score: 61.34
coord: 433..461
score: 76.95
IPR001609Myosin head, motor domainSMARTSM00242MYSc_2acoord: 62..753
e-value: 0.0
score: 1272.7
IPR001609Myosin head, motor domainPFAMPF00063Myosin_headcoord: 71..740
e-value: 1.2E-271
score: 902.8
IPR001609Myosin head, motor domainPROSITEPS51456MYOSIN_MOTORcoord: 68..752
score: 261.537
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 802..824
e-value: 0.078
score: 22.1
coord: 754..776
e-value: 4.4
score: 16.3
coord: 777..799
e-value: 8.3
score: 14.3
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 804..822
e-value: 0.012
score: 15.3
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 778..807
score: 7.272
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 803..831
score: 8.7
NoneNo IPR availableGENE3D4.10.270.10coord: 751..788
e-value: 5.0E-8
score: 32.1
coord: 789..830
e-value: 2.1E-8
score: 33.4
NoneNo IPR availableGENE3D3.40.50.300coord: 117..481
e-value: 3.6E-5
score: 22.8
NoneNo IPR availableCDDcd01380MYSc_Myo5coord: 83..740
e-value: 0.0
score: 1200.82
IPR004009Myosin, N-terminal, SH3-likePFAMPF02736Myosin_Ncoord: 12..50
e-value: 1.2E-5
score: 24.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..804

Blast
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BLAST of TCONS_00009345-protein vs. Swiss-Prot (Human)
Match: MYO5A (Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2)

HSP 1 Score: 1027.31 bits (2655), Expect = 0.000e+0
Identity = 505/834 (60.55%), Postives = 618/834 (74.10%), Query Frame = 0 
Query:    7 ELYTKGTRIWVPDPDQVWIGAELLEDLK--DDQLELTLEDGR--EVVLDLKVTKSLPPLRNPDILVGSDDLTTLSYLHEAAVLYNLQERFLNSQCIYTYCGIVLVALNPYQSVPLYGQEIISAYSGKSSHEIDPHIYAVAENAYRSMLNLNQNQSIIVSGESGAGKTVSAKYAMRYFANVGGSIAESTVEKKVLASNPIMEAIGNAKTIRNDNSSRFGKYIEINFDTSNSIIGANMRTYLLEKSRVVFQAANERNYHIFHQLCACHDHPDLQDLQLGESTEFYYTQQGENPTIPGVDDAKDFQETCEALSLLGIYSEQQRMIWRILAAILHLGNVSIEVTSKIKDECGIRQEDVHLMMVATLLGIDKNQLRKWLCARKIVATGDVYVKPLTFAEANNGRDALAKHIYSMLFKWIVEHINSSLAIATQRKSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYIREQITWSFIDFYDNQSCIDLIETKLGILDLLDEECRMPKGSDSAWALKLYKQHLKTSDHFIKPRMSEKAFIIRHYADDVIYDCDGFVEKNRDLINEEHINLLCASEYELVGELFRSDN-------------TASTHAPRKRTTSRVGKSAPKGKKTVGSEFRDSLKMLMDTLNSTSPHYVRCIKSNDGKEAFQLDLHRCVQQLRACGVLETIRISAAGYPSRWTYNEFFDRYRMLIPWKSINWDSLNDTCNTILSAHIDDDDKFQLGKTKIFFRAGAVAYLERLRSDLLKRSCITIQKNIKCWLACRKFQRMRKSAIAIQCFVRVYQAKRLVQSLRERRATIRIQKIWRGHSTRXLY 823
            ELYTK  R+W+PDP++VW  AELL+D K  D  L L LE+G+  E  LD K TK LP LRNPDILVG +DLT LSYLHE AVL+NL+ RF++S+ IYTYCGIVLVA+NPY+ +P+YG++II+AYSG++  ++DPHI+AVAE AY+ M    +NQSIIVSGESGAGKTVSAKYAMRYFA V GS +E+ VE+KVLASNPIME+IGNAKT RNDNSSRFGKYIEI FD    IIGANMRTYLLEKSRVVFQA  ERNYHIF+QLCA    P+ + L+LG +  F YT+QG +P I GVDDAK+   T +A +LLGI    Q  I+RILA ILHLGNV    TS+  D C I  +   L +   L+G+D  ++  WLC RK+    + Y+KP++  +A N RDALAKHIY+ LF WIV+++N +L  A ++ SFIGVLDIYGFETFE+NSFEQFCINYANEKLQQQFNMHVFKLEQEEY++EQI W+ IDFYDNQ CI+LIE+KLGILDLLDEEC+MPKG+D  WA KLY  HL     F KPR+S KAFII+H+AD V Y C+GF+EKN+D + EE I +L +S+++++ ELF+ D              T  T  P K T  R G+ A + KKTVG +FR+SL +LM+TLN+T+PHYVRCIK ND K  F  D  R VQQLRACGVLETIRISAAG+PSRWTY EFF RYR+L+  K +  D    TC  +L   I D DK+Q GKTKIFFRAG VAYLE+LR+D L+ +CI IQK I+ WL  +K+ RMRK+AI +Q +VR YQA+   + LR  +A   IQK WR +  R  Y
Sbjct:    5 ELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYHLDPK-TKELPHLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADNFNYTKQGGSPVIEGVDDAKEMAHTRQACTLLGISESHQMGIFRILAGILHLGNVGF--TSRDADSCTIPPKHEPLCIFCELMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDNVNQALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRTPAKPTKGRPGQMAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDR-KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGWLLRKKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRRRY 834
The following BLAST results are available for this feature:
BLAST of TCONS_00009345-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO5A0.000e+060.55Unconventional myosin-Va OS=Homo sapiens GN=MYO5A ... [more]
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