TCONS_00009354-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009354-protein
Unique NameTCONS_00009354-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length443

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009354-protein ID=TCONS_00009354-protein|Name=TCONS_00009354-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MGPKKKNEKGSKKKKDEKSKEQIEITNKLKLLLKDYEKQCSLLKSTADPA
LKATLKDFTTEGKYLTRFILRGAPIVDDTTKNLLITDINQTQNDEEKYLV
KIHPLIKSLRNHWYKTAKEFYFWDLDIPREDISELVTYLSHRSYNVEYIE
FLDCKIEWFTLKAFSSCFAVNETLTSVVLDYTNLKFDGLVGLCDGLQSTK
SVTKLSLCYCQLSPKCGAVLGDLVSKSTISELYVDGNQLECVGLIDILQI
FVDKAEQEAIKRKEEKQAKIESVVGMYSENEKKSAISTKTTEPNSTKNAS
SAKKKGKKKGRKKKKSAKPKLPPKCGAWLNVLHASDVGFDGMSTDVNGNL
LHQSLILIQRWIIFSEDLKEIDLDDNLIGELGGLEILSALRQRKEEGLKP
IYMKVTHRMDTQVFKNILSLASGKSKRGGKKKKKKKGNGKKRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005239XLOC_005239Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009354TCONS_00009354Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 145..321
e-value: 1.5E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..443
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 115..254
coord: 366..393
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 367..388
score: 7.62
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 228..249
score: 4.87

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009354-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top