TCONS_00009379-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009379-protein
Unique NameTCONS_00009379-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length130

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009379-protein ID=TCONS_00009379-protein|Name=TCONS_00009379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=130bp
MAEDPELAAIRARRMAEMQAQSGGVGGADQMKKQQEAMQREKEMKNSMLA
QILDQGARARLNSIALVKPEKAAMIENMLIQMARSGQLGGKMTEEGLVGV
LEKVNQQMANKNKVTITRRRYAMDSDSDDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005250XLOC_005250Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009379TCONS_00009379Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002836PDCD5-related
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..44
IPR002836PDCD5-related proteinPFAMPF01984dsDNA_bindcoord: 10..119
e-value: 1.5E-34
score: 118.5
IPR002836PDCD5-related proteinGENE3D1.10.8.140coord: 39..118
e-value: 1.6E-30
score: 104.3
IPR002836PDCD5-related proteinPIRSFPIRSF015730TFAR19coord: 1..130
e-value: 4.9E-39
score: 131.3
IPR002836PDCD5-related proteinSUPERFAMILY46950Double-stranded DNA-binding domaincoord: 10..116

Blast
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BLAST of TCONS_00009379-protein vs. Swiss-Prot (Human)
Match: PDCD5 (Programmed cell death protein 5 OS=Homo sapiens GN=PDCD5 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.389e-42
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0 
Query:    4 DPELAAIRARRMAEMQAQSGGVGGADQMKKQQEAMQREKEMKNSMLAQILDQGARARLNSIALVKPEKAAMIENMLIQMARSGQLGGKMTEEGLVGVLEKVNQQMANKNKVTITRRRYAMDSDSDDD 130
            D EL A+R +R+AE+QA+ G  G A     QQEA  RE EM+NS+LAQ+LDQ ARARL+++ALVKPEK   +EN LIQMAR GQL  K++E+GL+ +L+KV+QQ      V   RR+  MDSD DDD
Sbjct:    3 DEELEALRRQRLAELQAKHGDPGDA----AQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNRRK-VMDSDEDDD 124
The following BLAST results are available for this feature:
BLAST of TCONS_00009379-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDCD52.389e-4255.91Programmed cell death protein 5 OS=Homo sapiens GN... [more]
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