TCONS_00009800-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009800-protein
Unique NameTCONS_00009800-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1096

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009800-protein ID=TCONS_00009800-protein|Name=TCONS_00009800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1096bp
MKGFNTIVDYFDHGRVTEERVCLLPKHPLPSPSAFYHNYGGGVELGGIYV
KGLLPGGSADNSRKIVKGDRLLEVNGISVEALSKKQANDQLRKATQVSNF
ILEHNTVYDNLILPESEFFTVEIQKKQNGYGLSLTGGPEIDGVYVKQVQR
DSAAEHDGRIKKGDRLITINGRNVENSTRQQCTSMLKLSQDIVVLHLERC
VVGDDLPPLDTVLTVVELMKDGTGFGMSLTGGPEIGGIFVKALMPEGVAE
KDGRVNIGDRVVEMNSSSLDGYTRQQATELLKNSPPKATFILERYKQNRA
NLRRNRINAATSNGQLQTLVEENTSDQPFSFPLYNGAAPSVPPRHQNQQQ
TIQQNHHHIQQNNMLQNQQNNMLNQQNNMLNQQNPLQSQQNIPSRESAFK
QLQLQQHQLQQQQNQLMNPSNQQQTNLLNQQKQSVGQPPQNFHQQHLQQQ
QQLLLRQQQQLQQQSLGAGQPQSLPMGTHQQSRDLQVEQLPQMQHNTHQG
NSISSRIPSLIQRQQSLDRGSENSQAQLNHGQHSQSQFRPSQPIHQHQGA
SQQQNVHGSHQTQIAQNSGPDPQTGGMDLEIGPLNIIEQPMRRHLVANNE
LAEDSPQKFLKQFSKSVNTPGAAPSSSRLPLGPIASVIFGNNTNARGVHE
ITDISEDALPEDVQKVQEDIRDLRILRDTMYKPAETSKPAGSFIGIGPIL
PPPRSIDSNKTDKFNQDTVVRLQNGKLNTQVLTPTTGGTSLNTNRSPGSH
PSSLSATPGNMVYTEDLRPSIYAPVNKKSVSPNAQPEVIDLDKRPPVRGP
AQRSGMADQNQKKMPSAGVGGGGGGLKWMSLNDDSSCSPVVSPRNSIKHR
GESPKQQRENPKQQPQSFSNPIYSTASIPTSTVSSSQTNFNTPLYSRGGT
SGLINITQDSRQVDPRSTHRQPQLQQQQQQQQQQQNNSLASHSSYSASNA
TRQPSHSLPKTKPASSVIPVPLASRFNQNPHKSPLDGGDYIFEVTLFKGT
YGLGMNLAGGGSDDNPVVIKKIAVGTAADESGQLRVGDILLEVNGKPVSH
LQAKEVIALLRACPSEVQLLAKRPAFEVQAQKNVTGGSNLNYNVGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005484XLOC_005484Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009800TCONS_00009800Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 395..415
NoneNo IPR availableCOILSCoilCoilcoord: 292..312
NoneNo IPR availableCOILSCoilCoilcoord: 444..464
NoneNo IPR availableGENE3D2.30.42.10coord: 45..100
e-value: 3.4E-10
score: 39.3
NoneNo IPR availableGENE3D2.30.42.10coord: 106..204
e-value: 2.8E-19
score: 68.7
NoneNo IPR availableGENE3D2.30.42.10coord: 916..1086
e-value: 2.0E-23
score: 82.1
NoneNo IPR availableGENE3D2.30.42.10coord: 210..302
e-value: 2.2E-17
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 776..965
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 40..96
e-value: 6.24275E-11
score: 59.5026
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 991..1070
e-value: 3.13829E-19
score: 83.385
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 213..293
e-value: 1.5349E-15
score: 72.5994
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 119..195
e-value: 4.55467E-16
score: 74.1402
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 37..106
e-value: 1.1E-7
score: 41.5
coord: 128..201
e-value: 3.0E-18
score: 76.6
coord: 1001..1075
e-value: 6.9E-18
score: 75.4
coord: 223..296
e-value: 2.7E-15
score: 66.8
IPR001478PDZ domainPFAMPF00595PDZcoord: 45..96
e-value: 1.6E-8
score: 34.7
coord: 994..1070
e-value: 3.7E-15
score: 55.9
coord: 217..285
e-value: 2.1E-9
score: 37.5
coord: 121..197
e-value: 5.1E-14
score: 52.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 120..201
score: 19.139
IPR001478PDZ domainPROSITEPS50106PDZcoord: 993..1075
score: 19.159
IPR001478PDZ domainPROSITEPS50106PDZcoord: 215..296
score: 19.581
IPR001478PDZ domainPROSITEPS50106PDZcoord: 42..106
score: 14.074
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 113..200
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 207..297
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 41..101
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 979..1076
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 437..915
e-value: 4.9E-14
score: 51.2

Blast
[Close]
BLAST of TCONS_00009800-protein vs. Swiss-Prot (Human)
Match: MPDZ (Multiple PDZ domain protein OS=Homo sapiens GN=MPDZ PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.893e-21
Identity = 83/293 (28.33%), Postives = 132/293 (45.05%), Query Frame = 0 
Query:   45 LGGIYVKGLLPGGSADNSRKIVKGDRLLEVNGISVEALSKKQANDQLRKATQVSNFILEHNTVY-DNLILPESEF---FTVEIQKK-QNGYGLSLTGGPEIDGVYVKQVQRDSAAEHDGRIKKGDRLITINGRNVENSTRQQCTSMLKLSQDIVVLHLERCVVG-----------------------------------------DDLPPLDTVLTVVELMKDGT-GFGMSLTGGPEIGG------IFVKALMPEGVAEKDGRVNIGDRVVEMNSSSLDGYTRQQATELLKNS 284
            LG I +  +   G+A    ++  GD++LEVNGI +   +  +A + LR+  Q         T+Y D     E E     T+E+QKK   G GLS+ G     GV+V  + +   A+ DGR+ +GD+++ +NG +V N+T++   ++LK S   V L + R   G                                         + L      L  VE+ K  T   G+S+ GG  +G       IF+  + P GVA +  ++ +GDR+V +  +S +G T  QA  LLKN+
Sbjct: 1651 LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRL-----TLYRDEAPYKEEEVCDTLTIELQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIKAGPFHSERRPSQSSQVSEGSLSSFTFPLSGSSTSESLESSSKKNALASEIQGLRTVEMKKGPTDSLGISIAGG--VGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA 1936

HSP 2 Score: 88.5817 bits (218), Expect = 1.519e-17
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 0 
Query:  112 ILPESEFFTVEIQKKQNGYGLSLTGGPE--IDGVYVKQVQRDSAAEHDGRIKKGDRLITINGRNVENSTRQQCTSMLKLSQDIVVLHLERCVVGDDLP-----PLDTVLTVVELMKDGTGFGMSLTGGPEIGGIFVKALMPEGVAEKDGRVNIGDRVVEMNSSSLDGYTRQQATELLKNSPPKATFILERYK 296
            I+P  E  T+EI K + G GLS+ GG +  +  + + +V  + AA  DGR+  GD+++ +NG ++  +T  +  ++L+ +   V L L R    D+ P       DT LT+    K G G G+S+ G     G+FV  ++  G+A+ DGR+  GD+++ +N   +   T++    LLK S    T  + R K
Sbjct: 1622 IIPGCET-TIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYR----DEAPYKEEEVCDT-LTIELQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIK 1807

HSP 3 Score: 84.7297 bits (208), Expect = 2.256e-16
Identity = 58/200 (29.00%), Postives = 93/200 (46.50%), Query Frame = 0 
Query:   38 NYGGGVELG-------GIYVKGLLPGGSADNSRKIVKGDRLLEVNGISVEALSKKQANDQLRKA-----TQVSNFILEHNTVYDNLILP---------------------ESEFFTVEIQKKQNGYGLSLTG-----GPEIDGVYVKQVQRDSAAEHDGRIKKGDRLITINGRNVENSTRQQCTSMLKLSQDIVVLHLER 199
            N G G+  G       G+ VK +LPGG AD   ++  GD +L++    +  +S +Q    LR+        ++   +E  T    L +                      ESE F VE+ K   G G+++ G       E  G++VK + + SA EHDGRI+ GD++I ++G N++  T QQ   +L+ +   V+L L R
Sbjct:  262 NDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQCGNRVKLMIARGAIEERTAPTALGITLSSSPTSTPELRVDASTQKGEESETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 461
The following BLAST results are available for this feature:
BLAST of TCONS_00009800-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPDZ1.893e-2128.33Multiple PDZ domain protein OS=Homo sapiens GN=MPD... [more]
back to top