Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009843-protein ID=TCONS_00009843-protein|Name=TCONS_00009843-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1933bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00009843-protein vs. Swiss-Prot (Human)
Match: APOB (Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 4.705e-56 Identity = 252/1011 (24.93%), Postives = 443/1011 (43.82%), Query Frame = 0 Query: 42 SRFNQGKAYSYDYAGETVSNIEGASIQSTGMRIKSRVLITPLQECKFAMSLSNTEL-SLKSKNQD----FTKSRDSNLLAGDLQKYELLFTMNGNKIETLVAHDNEPTNILNIKRGILSILQFDQDQTTEKD------VNGICSS--TIKKEPDNTFTET---KKLHECKERAQNEYGVQAASFQTESAIKPL----DSTSKCNFVM--KGNIIKSVECNEKHIFRPFSAGYESASGAMTFVKQSMRF-NGPTAALRINLNAGSYNKQSTLVFDHEKEELKSTKALSAT--AESIMESLVSKKSLS-AQQN--SAHEFTALVMALRKMNQKAMTPIWDQYFECKSCSEDLKSVYRQYLLDAIAYCGTSTCVSFVRDVIVNGEMQGERVNMFLQSIALVADTSKDMIRDVLEIVKKQPTRQAYLTLGTLMNRHCTKTPKDCDFAQNNPVSIAE-----SYLEKKLGKNCDGQENYERVEELLMVLKAMGNA--RRPARVRSTLLKCAENSKHA-NITHSVFHAFKSMPCSDNLFTDEILKFIKNQEIDP-EKRIHAFRAAVSCPSEYVLERLVATLEKEPSKQVASYMWTTFSNIMESNSVEQANARELLKKITKTIPLKVVDLPHHQYSKFFE--KTL---GVQDAGVTAEGQLIFHPDGYLPRTAMFNLKGNLLG-NSIDLFESMVYVEGAEDMIGELVGIDGLFSKDF---LYEVFNSSMTMDKLKEMYYNH----QDQKREVKMT-GRMNKIHNQVNMKPTK--PTAHINIKVMGQEVRVFSYDDLYWLIDEIDN-----MNVIQLLTNAATGGHKT-FTKSLMFLELTHVVPTGMGLPLKMKLTGSTVASLELDGKFDIRNMFWGPGSIHVKGSIKPSAVVELSGQMG-IDSVYASSGIFVNTSMFTSNELKGNVIYQNGKILKINLDTPEEPITLFNVSSTPFMYLNEESNLIQG-TERRISPDYCLKSKMIGYGICTSVRIPFAFREYEAPYFPLSGPAHYGVKL 991 +RF + Y+Y+Y E+ S + G + + RI +V + Q C F + S L + N + K+++S A + +YEL + K L +EPT ILNIKRGI+S L + K V G CS+ T+K N TE + L +C G+ + + +PL S+ C + + K + C E+H+F PFS Y++ G + V Q+++ + P R G K+ L F+ STK+ S AE+++++L K L+ ++QN A+ F LV LR ++ +A+T + Q E S L A+ CG C + + + +++ +AL+ + S +R++ + + Q +R L +N ++ + NP E +YL +++ +C G E+Y + +L V+ MG + ++S++LKC +++K + I + A + M D E+L + P +KR+ A+ + PS+ + ++V L E ++QV +++ + +NI+ S ++ + ++L+K+ K L V + ++S+ ++ K++ + A EG LIF P+ YLP+ +M G S DL E + +G E + L G G F LY V + D + ++ +H +D K E M G M + + +K P A ++++G+E+ S DL L + + Q++ G K F +F+E +PTG GL L++ +G + K ++ NM + KPS VE MG I +A SG+ +NT+ F + L+ +V + GK LK + +P+ P+ L + +T + ++ +I E R S C K G CTS A A Y+PL+G ++L Sbjct: 44 TRFKHLRKYTYNYEAESSSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSEEFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLDTVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLAL-IKGMTRPLSTLISSSQSCQYTLDAKRKHVAEAICKEQHLFLPFS--YKNKYGMVAQVTQTLKLEDTPKINSRF---FGEGTKKMGLAFE-------STKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSDEAVTSLLPQLIEVSSP----------ITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPEPSAQQLREIFNMARDQRSRATLYALSHAVN----------NYHKTNPTGTQELLDIANYLMEQIQDDCTGDEDYTYL--ILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDK--DQEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANILNSEELDIQDLKKLVKEALKESQLPTV-MDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLIFDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALYWV--NGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRILGEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPTGAGLQLQISSSGVIAPGAKAGVKLEVANM-------QAELVAKPSVSVEFVTNMGIIIPDFARSGVQMNTNFFHESGLEAHVALKAGK-LKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENRQSWSVC-KQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELEL 1005 The following BLAST results are available for this feature:
BLAST of TCONS_00009843-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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