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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009917-protein ID=TCONS_00009917-protein|Name=TCONS_00009917-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
ERWGGDNCTNTRKSKKERKFEMEKSSSDQWKWEQGYDFKKTVDPYPSEYE
CAICRFLIRNCVQVPCKVGHFLCKSCLEGWQMSVIRIDGEDNFVLKDSKK
LENFDNETKDEEDEEREDTRIKCPICSLAYYDKEKVVPVPPIDRAISNLS
VYCQENDDCLWKGPINKYEEHVENECGYKTIQCELTGCSATFPRKDQKEH
EKDCPYRFEDCKFCNTAFQFIELNEDKHYAECDLRPIDCTNEGCQERLSR
KEMRSVHLEKCLFKRIKCDFVEFGCQEEMLKSEQDGHDKKFDSKHTKWML
LSLTRELSEIRKDKISIKQDLEGIKEELKKTKQTLLAKLVDEEEYKKEQK
NVIRKLITVEEQRLMLDDPKELFLQLGKEQKDIDPNLLEPFSYEGKEYDF
GNQLCRFLTIGYEQRMKMLLSKMEIGEIYQIEDGKKVIFKLQLVEQR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 307..345 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..20 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 120..151
coord: 43..84 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 245..287
e-value: 3.7E-8
score: 32.9
coord: 190..219
e-value: 1.4E-6
score: 27.9
coord: 220..244
e-value: 4.3E-4
score: 19.9
coord: 143..189
e-value: 2.7E-12
score: 46.2 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 45..139
e-value: 3.1E-9
score: 35.7 |
| IPR001293 | Zinc finger, TRAF-type | PFAM | PF02176 | zf-TRAF | coord: 228..287
e-value: 3.0E-11
score: 43.7
coord: 171..223
e-value: 1.7E-4
score: 22.1 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 171..214
score: 9.809 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 228..279
score: 11.064 |
| IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 159..218 |
Blast
The following BLAST results are available for this feature:
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