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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009928-protein ID=TCONS_00009928-protein|Name=TCONS_00009928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MACSAENFPQLPAVQVTSRGYDYEVRGDTPRECQCVICHHLLRKAIDLPC
GHAFCKRCLSDWENEILARNNNLVCSVCQTPYKAEQHHPNIPIDRMIRDS
LDIFCKQRNNGCNWVGKISNYEDSKHLEKLCDYTQAQCKYQEVGCDVEFI
RRDAQEHEKSYKDKHQAMLLQAFLQSKQAAKQEFNVAKESRREITRDLTS
VQQDSQMITGRLVSEKMDRERLELETNEKHEEIDAKIGTHQNTMRNLETT
IAKHQQSSDNNYTQIEQKNSELERQVELLKTQIQELKKEVDRTTVNDVTK
RDELRKDMEEKIKSGGVSGCCWWLTVLLAALPTIFILCILLHDKDFDWIN
FDGVIFNGKFGELWQNFLK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 255..296 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 27..98 |
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 35..78
e-value: 1.5E-5
score: 34.4 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 35..79
score: 11.707 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 34..81
e-value: 2.29467E-5
score: 40.5068 |
| IPR001293 | Zinc finger, TRAF-type | PFAM | PF02176 | zf-TRAF | coord: 115..157
e-value: 5.2E-6
score: 27.0 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 103..155
score: 8.669 |
| IPR027370 | RING-type zinc-finger, LisH dimerisation motif | PFAM | PF13445 | zf-RING_UBOX | coord: 35..62
e-value: 4.9E-6
score: 26.4 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 97..157
e-value: 3.5E-13
score: 49.0 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 16..96
e-value: 6.1E-13
score: 47.6 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 50..59 |
| IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 100..166 |
Blast
The following BLAST results are available for this feature:
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