TCONS_00009935-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009935-protein
Unique Name	TCONS_00009935-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1008

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009935-protein ID=TCONS_00009935-protein|Name=TCONS_00009935-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1008bp
MDDDSLDLHIVLSRLCSLNDSSDSATPLEPNKQHASLKRMSPGILKSPES
SSPSTQSPTMDMNSSPFASSDEQEMTRVRYPTKIKKHSLINTQHINGQLQ
IKLNYEIETGSLYVTIAEARALSYRSNMQPRNAYVKLYFLPDRSLQSKRR
TKTVLRSIAPCWNQTFMYVVKNQKQNNAAYFDGTILDMLPYLPKQDGFVI
RQTFNDHVTMSPSKLNTKLTFQGRSLEITLWDYDRTDNNQFIGEVLIDLS
EALLDNMPHWYPLHLHNYQATPLPTPTPMLSPQNYDPATIQRYSGKYQSP
SPSQSGSERNSPNTTSESLEEKEVDAKRLLNSINNLGSSPDISPSHHYPA
FPIAKTTTAQHDADTSIMSSFSSSSNSSVPANSSFSSSCSSQQLNDSLHN
HNSTLNKHNISIRGNNNTLELTADTATSGEDKTPVPSPSMSDFRFHNNGD
VLSTCDETDSVTGTSQESTIVPVDIFVRHTQPDEMPPPRMKPTVTRAASS
PSIVSEARPSLLARAQLFFQKQLDSLTHSSAASTTSNTTTTSSARLMSKE
NGITASSQTSTSSVTSTMTSSTTSNIPSDDDKLTDVTNTDSDQCHLTSFE
TDTTNTSLHRAHSLPPPNARHVIPEKMVKITNREKSPYRLMPEVSRNRHQ
NQYLSAGNSPGSSLGGSPDTTRRYIPIQQNPPQQKPHFETRSLPGSSPKT
SSFYDNRPQRGGSFNENDFKQIKYLRGFHRNPAGGHPHDPYMGMGYPPSS
RQMYDSEYDPYDTSSVGPPRRRPRRESFGSGRSSPTSSLESASARSGSSS
SLASSMVTLTSADSSMSWITPSLRLSGDTQLIDFVEGLGPAQMVGRQVLG
SPLMGDIQLSLYERRGALEVEIIRAKGLLMKSGAKTLPAPYVKVYLLQGK
KCIVKKKTKTARRTTDPLYSQMLEFPQDYKGKVLQVMVWGDYSRVDRKVF
MGVCQILLDDLDLSHLVMGWYKLFSTASIVQPPSPASSTQTSSSMPYGSN
SSSGSRGF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005571	XLOC_005571	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009935	TCONS_00009935	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 111..261 e-value: 1.2E-10 score: 51.4 coord: 867..970 e-value: 1.0E-13 score: 61.5
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 85..271 e-value: 8.9E-26 score: 89.8
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 837..979 e-value: 2.8E-24 score: 85.0
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 866..973 e-value: 1.5E-15 score: 57.2 coord: 110..173 e-value: 7.5E-7 score: 29.3 coord: 218..263 e-value: 3.1E-5 score: 24.1
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 111..246 score: 13.535
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 868..955 score: 11.877
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 226..267 coord: 97..179
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 851..975
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..619
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 728..800
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 652..716
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 980..1008
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..444

Blast

[Close]

BLAST of TCONS_00009935-protein vs. Swiss-Prot (Human)
Match: RIMS2 (Regulating synaptic membrane exocytosis protein 2 OS=Homo sapiens GN=RIMS2 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 2.311e-63
Identity = 105/183 (57.38%), Postives = 142/183 (77.60%), Query Frame = 0

Query:  800 SSLASSMVTLTSADSSMSWITPSLRLSGDTQLIDFVEGLGPAQMVGRQVLGSPLMGDIQLSLYERRGALEVEIIRAKGLLMKSGAKTLPAPYVKVYLLQGKKCIVKKKTKTARRTTDPLYSQMLEFPQDYKGKVLQVMVWGDYSRVDRKVFMGVCQILLDDLDLSHLVMGWYKLFSTASIVQP 982
            +S  S+  ++ S  S  + I P +RL+ D+Q  DF++GLGPAQ+VGRQ L +P MGDIQ+ + +++G LEVEIIRA+GL++K G+KTLPAPYVKVYLL    CI KKKTK AR+T +PLY Q+L F +  +GKVLQ++VWGDY R+D K FMGV QILLD+L+LS++V+GW+KLF  +S+V P
Sbjct: 1204 ASRESTDGSMNSYSSEGNLIFPGVRLASDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQVGMMDKKGQLEVEIIRARGLVVKPGSKTLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPLYQQLLSFEESPQGKVLQIIVWGDYGRMDHKSFMGVAQILLDELELSNMVIGWFKLFPPSSLVDP 1386

HSP 2 Score: 134.42 bits (337), Expect = 8.446e-32
Identity = 72/190 (37.89%), Postives = 102/190 (53.68%), Query Frame = 0

Query:   93 QHINGQLQIKLNYEIETGSLYVTIAEARALSYRSNMQPRNAYVKLYFLPDRSLQSKRRTKTVLRSIAPCWNQTFMYVVKNQKQNNAAYFDGTILDMLPYLPKQDGFVIRQTFNDHVTMSPSKLNTKLTFQGRSLEITLWDYDRT--DNNQFIGEVLIDLSEALLDNMPHWYPLHLHNYQATPLPTPTPML 280
            Q ++GQL IKL ++     L VTI  A+ L  R + +PRN YVK+YFLPDRS ++KRRTKTV +++ P WNQTF+Y   ++++                                             F+ R LEITLWD  R   + ++F+GE+LI+L  ALLD+ PHWY L  H+  + PLP P+P +
Sbjct:  803 QFLSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRRE---------------------------------------------FRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYM 947

The following BLAST results are available for this feature:

BLAST of TCONS_00009935-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009935-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RIMS2	2.311e-63	57.38	Regulating synaptic membrane exocytosis protein 2 ...	[more]

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TCONS_00009935-protein (polypeptide) - C. hemisphaerica