TCONS_00009939-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009939-protein
Unique NameTCONS_00009939-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length558

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009939-protein ID=TCONS_00009939-protein|Name=TCONS_00009939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MSLPFLPGNTFADPTKTKYHRGQSLGYKNGYTMPKVSNNNPLTEDELNAL
ANHKPSLTYGQSAQAPPEDFIPAHVAFDKKVLLFFAYFKQTVHESPNEHY
NVRPVKIYYYLEDDSIAVIEPIVENSGIPQGKLIKRQRLPKNDLGEHWHW
KDLNININVTFYGKSFMIYDCNKWTKDYLISQGKVLNLQSDCPADPYTES
RNQPLRTYKTPPEFDKLKQFLELDRKVLRFYCIWDDRDSMFGEIRPCVLH
YYLVDDTMEIREVHTPNDGHDPFPVLIGRQRMPIDRNNVPASFPAISMEI
SEHEICDWFEPKHFQLGATVFIMGRRFLLYDCDTCTKDYYGVKFNVKEFP
TIDVSEKFPDNVNKEIPPYNGFGSLEDSLQSCLSLVPQPPKKDFIKMLGN
DNKVLRYEATLESMRSEDKLRRFIISYRLSDDMINVYEKAQRNSGIIGGK
FLERTRVCKPGSQIDSPEFYTPADFSIGAVIEIFKHRFKITDVDEYVLKY
LESFPGKFPLDTINSIRKKLGKDTVTEQAEPTTGQSEDIKSESKWRYTGE
GADYKWRE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005572XLOC_005572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009939TCONS_00009939Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006602Uncharacterised_DM10
IPR010554DUF1126
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006602Uncharacterised domain DM10SMARTSM00676dm10coord: 401..505
e-value: 2.0E-37
score: 140.3
coord: 78..183
e-value: 1.7E-41
score: 153.8
coord: 224..344
e-value: 8.9E-32
score: 121.6
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 78..183
score: 31.014
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 224..344
score: 29.784
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 401..505
score: 35.563
IPR010554Domain of unknown function DUF1126PFAMPF06565DUF1126coord: 217..336
e-value: 1.3E-32
score: 111.6
coord: 72..175
e-value: 7.5E-31
score: 105.9
coord: 395..496
e-value: 2.1E-30
score: 104.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..544

Blast
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BLAST of TCONS_00009939-protein vs. Swiss-Prot (Human)
Match: EFHC1 (EF-hand domain-containing protein 1 OS=Homo sapiens GN=EFHC1 PE=1 SV=1)

HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0
Identity = 302/530 (56.98%), Postives = 381/530 (71.89%), Query Frame = 0 
Query:    2 SLPFLPGNTFADPTKTKYHRGQSLGYKNGYTM---PKVSNN------NPLTEDELNALANHKPSLTYGQSAQAPPEDFIPAHVAFDKKVLLFFAYFKQTVHESPNEHYNVRPVKIYYYLEDDSIAVIEPIVENSGIPQGKLIKRQRLPKNDLGEHWHWKDLNININVTFYGKSFMIYDCNKWTKDYLISQGKVLNLQSDCPADPYTESRNQPLRTYKTPPEFDKLKQFLELDRKVLRFYCIWDDRDSMFGEIRPCVLHYYLVDDTMEIREVHTPNDGHDPFPVLIGRQRMPIDRNNVPASFPAISMEISEHEICDWFEPKHFQLGATVFIMGRRFLLYDCDTCTKDYYGVKFNVKEFPTIDVSEKFPDNVNKEIPPYNGFGSLEDSLQSCLSLVPQPPKKDFIKMLGNDNKVLRYEATLESMRSEDKLRRFIISYRLSDDMINVYEKAQRNSGIIGGKFLERTRVCKPGSQIDSPEFYTPADFSIGAVIEIFKHRFKITDVDEYVLKYLESFPGKFPLDTINSIRKKLGK 522
             LPFLPG +F D TKT +HR Q+L Y+NGY +   P V         N L++ EL+ LA+  P LTYGQ  QAPP DFIPAHVAFDKKVL F AYF++ V  S  E Y +R V IYYYLEDDS++VIEP+VENSGI QGKLIKRQRL KND G+H+HWKDLN  IN+T YGK+F + DC+++T+ +L SQG  LN       DPYTE R QPLR Y TP +FD+LKQFL  D++VLRFY IWDD DSM+GE R  ++HYYL+DDT+EIREVH  NDG DPFP+L+ RQR+P        +FP   +EIS+ E+ +W+  K F +G ++ I+GR F +YDCD  T+ YY  KF + + P IDVS++ P  V +E+PPYNGFG +EDS Q+C +L+P+ PKKD IKML NDNKVLRY A LES   EDK RRF+ SY L+ DMI+++E   RNSGIIGGK+L RT+V KP S +D+P +Y P+DF IGAVIE+F HRF I D DEYVLKY+ES   ++  + + SI+  + K
Sbjct:    8 GLPFLPGTSFKDSTKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQAELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQVNIYYYLEDDSMSVIEPVVENSGILQGKLIKRQRLAKNDRGDHYHWKDLNRGINITIYGKTFRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDKQVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRVPKVLVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFGITDLPRIDVSKREPPPVKQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVLRYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTVDNPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRK 537
The following BLAST results are available for this feature:
BLAST of TCONS_00009939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFHC10.000e+056.98EF-hand domain-containing protein 1 OS=Homo sapien... [more]
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