TCONS_00010074-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010074-protein
Unique NameTCONS_00010074-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010074-protein ID=TCONS_00010074-protein|Name=TCONS_00010074-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1267bp
MTNFIQFFFLVCFLKIIFCNDGCPGGWNEWTECKGCFRTQTRTCKDGDSN
EERRECKIDPCKCHFKIDDEQRSTAFILKQGSQQYKCDLGMRHFWYRFTS
PAGGKMPTTEPQQNACGATQSIWLDGSHPVDIGNETTLQARVVSQIRAYT
PWSVKAKKCQSKNYKDETFFIYYLESVPTCPMVYCAGSEKRCPGQLSSKN
GFTPGCSDNYPKYNNPPTINIKLQDNKIRMTCIIDPLEKTPNVKHEVSFY
QGANNKLIKMVVVRGDETDVAPYVENPENWGEATIFNLGNEFFCQVISYF
EDKVNVTGKGSPQKSNVKFAGIKVEPERLVFKSNEDVKSIKIYSTVGISQ
MDGCSLQSIFHETQDDAVPMLCTKCLTNDFYGRENAWELNVTRTSFTNGL
SEHMFIRIITMPNGNLRDWDQGTHEVMVIVNKAGPKRCQATGDPHFTTFD
GLYFHMYHVGDYVMMGTHGGRTMVHMRTHVCNGRVSCICGIAVRYGDDVV
TIDMCRGGVSVRFPSKKPLNPAFKVTRVGSGRNYNIFTPDGVSIRFDGHL
YWWTGRPYYANVYIQTTSDYRDKTFGMCGNNNDDIEDDHMTKDGKKLESH
FNIVASELYTAEWKIPRGHSLFYYQPGWTECDIERKKFCSCRGKDTIECK
EVTTRSQRWVEPDGIEIHPDDGVATECGGGGPLSRRRRRSTKNVIRVPND
DDGGYDFDPQQLNITDLPTFPTKSGTTRAEAESNCTKAIEESTFGKACLD
MFPSLNLTTLVEECVTDIEIMDDLAGPTASVVDSITELCKFTVINEITKN
STSTTNNTASNSTTDGAGNSGEMVIPDVLKNNLCPSDCSGNGKCVNGTCQ
CDYDFISLDCSIRRNSPLQINSLANGGLCDIRKRDCLRARMLGWNFVDSL
NLQSRSVEVEIPTEGQGYTKTKKVNVDDAFVLSLSEIVVEIPHDPTEINN
VEIADNVGRPVGGFLVSVSSNGFNSTSNQSLFVVYDGKCLDCKSKNLQIC
TQKTDTCLVNGYCFGSKEVHPNDWCQICDPQANVFAARKDNKAPIFRKDK
SVKAIKGQRNRFNIIAEDPENKTITYSLNVGASSMYKITNGGLLSFTPTE
VGVSRVTIRATDICGAYIDQEFTFETLKCPCEGLNGGSCRFNETDRMQLE
CVCPQGCTGERCDQPLKGQNCKVVQDKDSDEDKTNLYLIIGLAIGGPLLL
LVILFLACRLLKHGRVSSTDNQVAMKNILVKEGPNVEQTPVVEINIGDNG
AGGDKDGKDNTGFNNTD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005650XLOC_005650Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010074TCONS_00010074Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001846VWF_type-D
IPR013783Ig-like_fold
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001846von Willebrand factor, type D domainSMARTSM00216VWD_2coord: 427..594
e-value: 1.0E-11
score: 54.9
IPR001846von Willebrand factor, type D domainPFAMPF00094VWDcoord: 438..595
e-value: 1.6E-17
score: 64.1
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 437..644
score: 20.911
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1033..1119
e-value: 1.4E-9
score: 37.9
NoneNo IPR availableGENE3D2.10.25.10coord: 1120..1167
e-value: 0.013
score: 15.1
NoneNo IPR availableGENE3D2.60.40.1510coord: 552..861
e-value: 1.5E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 801..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1246..1267
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 21..62
score: 8.425

Blast
BLAST of TCONS_00010074-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 167.933 bits (424), Expect = 9.063e-42
Identity = 125/460 (27.17%), Postives = 218/460 (47.39%), Query Frame = 0
Query:  717 LPTFPTKSGTTRAEAESNCTKAIEESTFGKACLDMFPSLNLTTLVEECVTDIEIMDDLAGPTASVVDSITELCKFTVINEITKNSTSTTNNTASNSTTDGAGNSGEMVIPDVLKNNLCPSDCSGNGKCVNGTCQCDYDFISLDCSIRRNSPLQINSLANGGLCDIRKRDCLRARMLGWNFVDSLNLQSRSVEVEIPTEGQGYTKTKKVNVDDAFVLSLSEIVVEIPHDPTEINNVEIADNVGRPVGGFLVSVSSNGFNSTSNQSLFVVYDGKCLDCKSKNLQICTQKTDTCLVNGYCFGSKEVHPNDWCQICDPQANVF--AARKDNKAPIFR--KDKSVKAIKGQRNRFNIIAEDPENKTITYSLNVGASSMYKITNGGLLSFTPTEVGVSRVTIRATDICGAYIDQEFTFETLKCPCEGLNGGSC----RFNETDRMQLECVCPQGCTGERCDQPLKG 1168
             P++PT SG T     + C + +  S+ G+ CL  F    L +++E CV D+ + DDL+   A V     E C+  ++ E   N             T+  G S    I D+L    CP+ CSGNG+C+   C C   F S DCS   +   +I  L N G CD++K +C+  R+ G  F +  +++    +++       +   + +     F  S + +  ++P D  + + +++    G+P G + + VS++G+   SN  + V+YDG C  C       CT K + C+++G C+   + +P   C IC P+ + F  +  ++N+ P+ +  +DK ++   G+   +  +A DPE   I ++L+ G      +++ GL  +    +   ++T+R  D C A  +   T E     C+ LNGGSC     F+    + L CVC  G  G  C+  + G
Sbjct:  792 FPSWPTPSGLTEYSTLTLCQETLANSSIGRLCL-AFLGKRLDSVIEMCVKDVLLKDDLSWAEAGVALLENE-CEKRIVEEGKYN-------------TEEYGTS----IEDILSVLKCPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQY--NSSEWMPGEPIYTQTVFHNSRA-VDCQLPTDVQQFDTMDLVG--GKPTGKWQLKVSNDGYK-FSNPKITVIYDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDK-LQTFYGENFEYQFVAFDPEGSDIHFTLDSGPEGA-SVSSAGLFMWKTDLLTTQQITVRLNDDCDA--ETRVTIEVTVKSCDCLNGGSCVSDRNFSPGSGVYL-CVCLPGFHGSLCEVDISG 1221          

HSP 2 Score: 106.686 bits (265), Expect = 5.115e-23
Identity = 152/660 (23.03%), Postives = 256/660 (38.79%), Query Frame = 0
Query:   72 RSTAFILKQGS-QQYKCDLGMRHFWYRFT---SPAGGKMPTTEPQQNACGATQSIWLDGSHPVDIGNETTLQARVVSQIRAYTPWSV---KAKKC-------QSKNYKDETFFIYYLESVPTCPMVYCA-----------GSEKR-----CPGQLSSKNGFTPGCSDNYPKYNNPPTINIKLQDNKIRMTCIIDPLEKTPNVKHEVSF---YQGANNKLIKMVVVRGDETDVAPYVENPENWGEATIFNLGNEFFCQVISYFEDKVNVTGKGSPQKSNVKFAGIKVEPERLVFKSNEDVKSIKIYSTVGISQMDGCSLQSIFHETQDDAVPMLCTKCLTNDFYGREN--------AWELNVTRTS-FTNGLSEHMFIRIITMPNGNLRDWDQGTH-------------------EVMVIVNKAGPKRCQATGDPHFTTFDGLYFHMYHVGDYVMMGTHGGRTMVHMRTHVCNGR---VSCICGIAVRYGDDVVTIDMCRGGV----SVRFPSKKPLNPAFKVTRVGSGRNYNIFTPDGVSIRFDGHLYWWTGRPYYANVYIQTTS-DYRDKTFGMCGNNNDDIEDDHMTKDGKKLESHFNIVASELYTAEWKIPRGHSLFYY---------QPGWTECDIERKKFCSCRGKDTIECKEVT 653
            R  ++ L+Q + Q   CD  +   WYRF     PA  +MPT   + N CG    IWL         +ET      + Q+ A   W       K C         +N  +  F +Y L+    C M YCA           GS++      C  QL++     P            P + ++L ++++   C  D     P  K+ V F   +   +++ +K  + +         +E      +     LG+  FC    +F +  +V  +    +S   FAG K++PE      +     ++I STV I       + S F E   +    L  K +     GRE+        +  +++ +TS   NG   H F+    + + + RD D+ ++                    + + V       C    DPH  TFDG  +  +  G +V+  +      VH+R   C      VSC CG   + G D+VT DMC G +       F   + +    K++    GR   I+   G  IR D  L  W       ++ I+  S DYR+ T G+CG  +++ E+D   K+G +++ +FN   +  +  EW+I  G S+            +P +  C ++   + S    D++   E+ 
Sbjct:   39 RFDSWHLQQSAVQDLICDHSLSPGWYRFLILDRPA--EMPTKCVEMNHCGTQAPIWLSLRD-----SETLPSPGEIKQLTACATWQFLFSTTKDCCLFQIPVSVRNCGN--FSVYLLQPTQGC-MGYCAEAISDARLHPCGSDETETGGDCVRQLAASLPPPPA---------GRPEVLVELIESRLFCRCSFD----VPATKNSVGFHIAWSRLSSQEVKEELTQETTVQAFSLLEL-----DGINLRLGDRIFCSASVFFLENPHV--QSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPI-------ICSEFSELDQECKISLKLKTIGQ---GREHLGLNLALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFS-RDGDRVSNIVVQPIVNEDFLWNNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRAD--LGEWG-----MSLTIRAPSVDYRN-TLGLCGTFDENPENDFHDKNGMQIDQNFNNYVA--FINEWRILPGKSMSDTLPVSMTSPGKPSYCSCSLDTAAYPSSEDLDSVSRSEIA 647          
The following BLAST results are available for this feature:
BLAST of TCONS_00010074-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWDE9.063e-4227.17von Willebrand factor D and EGF domain-containing ... [more]
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