TCONS_00010109-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010109-protein
Unique Name	TCONS_00010109-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	904

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010109-protein ID=TCONS_00010109-protein|Name=TCONS_00010109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=904bp
MKAFLLVVTFAVFLAHAQADDDPCQNNWGAWSTCSGCDKYRKRKCLLDET
IVDQGRRCLIDPCGCHIEINDEQRSTGHFIDQNSQQFKCDLRMRSTWYQF
TSGAGGEMPTTAPKLNACGAKRSVWLDGTNPTKVGEIKTVKTAVVCKGCY
TKPWDVKIKKCKDEKDDKEFFIYNLPAVPRCPMVYCAGSETRCKDGFISP
TGFTPGCTDNYPKTKVPTIDIKLVNNKIRLICKVDSTDTSASVRHQVEFY
QGNELVEGLYGKLVATKILAGTENEAFAENSQTNPLFSLSNEFYCQVSSY
YDNLLNITGKSNPQRTAFKFAGIKVEPASLTFKKMDEVHSIRIYSTIDIG
YIEDWPQGCPITVLFYESNDVAIPTDCQKCFNRTGEYVGKENAWELKVRR
TDFNNGKKETMFIRIDVSPDLMDWERSQHEVAIHIEKAPAKKCSATGDPH
ITTFDGLYYHVYHAGDYAMMGTEYGRVEVHMRTFQCGTSVTCICGIAIRY
GDDVIILDTCRGGLTPKFPSKKKLNPAMKIIQLKGYNGLYYDIVTPDGVT
IEFRGHLSGGWNPSYCNVYIKTPSDYQNRTFGLCGNTNGKKDDELMSKDE
ETVFKSYENVIASLEYTNEWKLGPGDSLFFFTPDQVDCARSRKKFCRCKS
GSEIECNEVVKNVPKWTENGVEVHPDDGVIDGCQPVQDENNQKRKRRSNP
NILIVPSDDEEPYTYKPPQVNITSDPKFPTKSGTTEQVAYNECNIAITQS
TFGKACLRMYPDMDFTTLVDECVLDIKITDDIKASTSSAQNSFTALCKFV
VIEEFTKNSTSTPQNNNGTKANSTTDKDETGPPVFIPPPILVENLCPNDC
SGQGACVNSTCICNANFTSTDCSMEKGLPPTVRGISNGGLCDIRKRDCLR
ARII

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005666	XLOC_005666	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010109	TCONS_00010109	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001846	VWF_type-D
IPR023296	Glyco_hydro_beta-prop

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001846	von Willebrand factor, type D domain	SMART	SM00216	VWD_2	coord: 431..600 e-value: 2.0E-10 score: 50.6
IPR001846	von Willebrand factor, type D domain	PFAM	PF00094	VWD	coord: 443..599 e-value: 7.4E-17 score: 62.0
IPR001846	von Willebrand factor, type D domain	PROSITE	PS51233	VWFD	coord: 442..659 score: 20.469
IPR023296	Glycosyl hydrolase, five-bladed beta-propellor domain	GENE3D	2.115.10.20		coord: 401..748 e-value: 5.4E-4 score: 18.3
None	No IPR available	GENE3D	2.10.25.10		coord: 825..877 e-value: 5.0E-5 score: 22.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 676..714
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 810..832

Blast

[Close]

BLAST of TCONS_00010109-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 121.324 bits (303), Expect = 8.537e-28
Identity = 140/593 (23.61%), Postives = 236/593 (39.80%), Query Frame = 0

Query:   78 HFIDQNSQQFKCDLRMRSTWYQF-TSGAGGEMPTTAPKLNACGAKRSVWL---DGTNPTKVGEIKTVKTAVVCKGCYTKPWD-------VKIKKCKDEKDDKEFFIYNLPAVPRCPMVYCAGSETRCKDGFISPTGF----TPG-CTDNY------PKTKVPTIDIKLVNNKIRLICKVDSTDTSASVRHQVEFYQGNELVEGLYGKLVATKILAGTENEAFAENSQTNPLFSLSNEFYCQVSSYYDNLLNITGKSNPQRTAFKFAGIKVEPASLTFKKMDEVHSIRIYSTIDI--GYIEDWPQGCPITVLF--------YESNDVAIPTDCQKCFNRTGEYVGK--ENAWELKVRRTDF--NNGKKETMFIRIDVSPDLMDWERSQHEVAIHIEKAPAKKCSATGDPHITTFDGLYYHVYHAGDYAMMGTEYGRVEVHMRTFQCGT---SVTCICGIAIRYGDDVIILDTCRGGLTPKFPSK--KKLNPAMKIIQLKGYNGLYYDIVTPDGVTIEFRGHLSGGWNPSYCNVYIKTPS-DYQNRTFGLCGNTNGKKDDELMSKDEETVFKSYENVIASLEYTNEWKLGPGDSL 628
            H      Q   CD  +   WY+F       EMPT   ++N CG +  +WL   D       GEIK +      +  ++   D       V ++ C +      F +Y L     C M YCA + +   D  + P G     T G C          P    P + ++L+ +++   C  D   T  SV   + + +       L  + V  ++   T  +AF+          L +  +C  S ++  L N   +S    +   FAG K++P   T  +  + + +RI ST+ I      +  Q C I++          +   ++A+ + C     +T         + +      TDF  +  +   + ++  V+ D +        + I ++  P   C    DPHI TFDG  Y  +  G + +  +     EVH+R + C +    V+C CG   + G D++  D C G L    P    K  +    I   + Y G    I    G  I  R  L G W  S   + I+ PS DY+N T GLCG  +   +++   K+   + +++ N +A   + NEW++ PG S+
Sbjct:   44 HLQQSAVQDLICDHSLSPGWYRFLILDRPAEMPTKCVEMNHCGTQAPIWLSLRDSETLPSPGEIKQLTACATWQFLFSTTKDCCLFQIPVSVRNCGN------FSVYLLQPTQGC-MGYCAEAIS---DARLHPCGSDETETGGDCVRQLAASLPPPPAGRPEVLVELIESRLFCRCSFDVPATKNSVGFHIAWSR-------LSSQEVKEELTQETTVQAFSLLELDGINLRLGDRIFCSASVFF--LENPHVQSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKLKTIGQGREHLGLNLAL-SSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNIVVQPIVNEDFLWNNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFI--RADL-GEWGMS---LTIRAPSVDYRN-TLGLCGTFDENPENDFHDKNGMQIDQNFNNYVA---FINEWRILPGKSM 606

The following BLAST results are available for this feature:

BLAST of TCONS_00010109-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010109-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VWDE	8.537e-28	23.61	von Willebrand factor D and EGF domain-containing ...	[more]

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TCONS_00010109-protein (polypeptide) - C. hemisphaerica