TCONS_00010281-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010281-protein
Unique NameTCONS_00010281-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010281-protein ID=TCONS_00010281-protein|Name=TCONS_00010281-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
RTVNYEAIGKFVDHLVQTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKF
GKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEY
LSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLK
CSSENMYEMIVPLKFKPKPLKVFYGFDWQFLGGLAMGADCAVCTSFNFIG
NKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLIS
GIDMGQPRRPLHQFSEKQIKEIKAFLTKEGYLKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005777XLOC_005777Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010281TCONS_00010281Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
IPR013785Aldolase_TIM
IPR020624Schiff_base-form_aldolases_CS
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016829 lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002220DapA-likePRINTSPR00146DHPICSNTHASEcoord: 56..74
score: 21.58
coord: 115..132
score: 29.63
coord: 19..40
score: 45.91
IPR002220DapA-likeSMARTSM01130DHDPS_2coord: 1..280
e-value: 4.4E-42
score: 155.8
IPR002220DapA-likePIRSFPIRSF001365DHDPScoord: 1..283
e-value: 1.4E-48
score: 162.8
IPR002220DapA-likePFAMPF00701DHDPScoord: 2..277
e-value: 2.5E-46
score: 157.6
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..279
e-value: 2.0E-63
score: 213.7
IPR020624Schiff base-forming aldolase, conserved sitePROSITEPS00665DHDPS_1coord: 22..39
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 2..278

Blast
[Close]
BLAST of TCONS_00010281-protein vs. Swiss-Prot (Human)
Match: NPL (N-acetylneuraminate lyase OS=Homo sapiens GN=NPL PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 5.261e-66
Identity = 108/267 (40.45%), Postives = 165/267 (61.80%), Query Frame = 0 
Query:    3 VNYEAIGKFVDHLV-QTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKFGKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEYLSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLKCSSENMYEMIVPL-KFKPKPLKVFYGFDWQFLGGLAMGADCAVCTSFNFIGNKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLISGIDMGQPRRPLHQFSEK 267
            +N+  IG++VD+LV + GV  +FV+GTTGE  SLS+SER+ +AE W+  GKDKLD +II  G+  + E++E+ +HA E GAD +A I+P FLKP  ++ L ++L+EVA+ AP  PF YYH+P+ TGVK+   +L+    +KI TF GLK S  ++ +    + + + +     +G D Q L  L MGA  AV +++N++G K  ++ +A++  +   A + Q  I    N       GV+  K   TL+SGI MG PR PL + S +
Sbjct:   25 INFSVIGQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291
The following BLAST results are available for this feature:
BLAST of TCONS_00010281-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPL5.261e-6640.45N-acetylneuraminate lyase OS=Homo sapiens GN=NPL P... [more]
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