TCONS_00010418-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010418-protein
Unique NameTCONS_00010418-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1137

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010418-protein ID=TCONS_00010418-protein|Name=TCONS_00010418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1137bp
MTTFSKYLNTNSMKNFNDYVIVGFARTGSFPQFITFSFAFKTFYHHTQGY
NQFLIAQTKLFSQGSVSNMFIADTIQYIRDITGQTHDNYNGYIFVKPTMV
QPTMMQTKINPHPSTTIDNISPSTVSTQPSSKLPHIEGPIALYQIGPFKV
TFCDFMVFPIPDNLFKDDVDGSTRRLKLSLTDAGHQPVSTSSWIFVDSDI
QVIYGYLKVEDYIELRGGGANKDTFFHLVATNSRGGSTSLRFSVELPEKI
PDILYTVSMKVTPFYQPSIPEINEQLMLLTKISAYFGLPSKFSWINIISF
KRQPNENQITIAWTNCTLTGQQCHNKDVSTIASKVVLDNGQPNSVFARFL
SPQYIINEIRATTSSQCQHTTTSTLQPTSSVIGSSYPIIVNNMPTLEVTT
LNYFTYKIPFNTFYDSTDGYTPYLTLSMSSNAGKPIPRSSWIQFNAAAQE
INAFLYVDILNGREVENFQFVLTATNSFARSKNMVINIQCRRKVFPMGGF
YVEFTGREYFNQIMNNIQVLTILLQRYFQYTGNRYNTEIVSFQRNTGLNF
RMRFMYHRVIDSSNDCNVTELYNLQKILLTSQGQINSDFMFAFLPEAVAS
HVTITTFGSCLNLPTTTPSTPQPVILNQIQPLVISNAGFFQYSIPEKTFY
DAKDGFTPMMQLKLLDQYKTEVRKDSWITLSNNQVILASPSSMQFPNTRT
NQFYLRVINSQLKFTDLALEVTVINQSPVDALRITLTGVHKFQSISSTVD
IIIYIMEKLNSYLYDQTNRKETVLISFYHSSSTFTMHLDDASLIGDICSS
NAFRTLEKKIYITPGNIHPQMVMELFPQVSLTEVQFSKQCNRPITTSKPT
TTEKQNTPPYVNQPIQPIHISFGRLLFKYISPQTFLDREDGDARHLQLTL
LHNNGGTVQPDNWVQMNQNTLLIYGSYTLQDYNMLPFDKYRYMLRATDSK
GSFTATPIIFERPSTSLEYSFKIRTTITMFYDSTTSLVNEQILFITKINS
YITTYLRYGIQIITFTRSILIKQLIIEWALDNLSDDICPWQTLQLITDKF
VSNSQPSSGYRSIMRPEYSVSSVEIQRMPSCQQITISPSPSSTTTHLQTS
TSIPTTPIPEPPTINTNIFPIRLSTKQSAIFIXTSDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005858XLOC_005858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010418TCONS_00010418Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008465DAG1
IPR030398SEA_DG_dom
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016010dystrophin-associated glycoprotein complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007016cytoskeletal anchoring at plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007016 cytoskeletal anchoring at plasma membrane
cellular_component GO:0016010 dystrophin-associated glycoprotein complex
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008465DystroglycanPFAMPF05454DAG1coord: 271..381
e-value: 2.8E-9
score: 36.7
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 968..1080
score: 11.841
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 250..366
score: 17.794
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 387..485

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010418-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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