TCONS_00010425-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010425-protein
Unique NameTCONS_00010425-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length430

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010425-protein ID=TCONS_00010425-protein|Name=TCONS_00010425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
MREIPGFYYDEEKKKYFKITKDHIQSKRSKVKVAVKETNAATKNKKSASL
NLPHEVWKRDIYGKDSALIRLSMQTIFHSLKYKPQHIIEIPLSNPLNGAE
EDSSISYYIKFNSNGKNVLVARRDSHDIFTTKLSSNKRLHFELEKRQESW
YNRLVTSYKNFNTFHWSPWHDSSFVYVFTTEKLLRPGFIQYKSFAKIFHH
QQDEGCNAVMTCKHGVTWNCCNWSRFPFHSSRVVVGESAKKLRISCSETL
TLTQSVHLTDRPKAVESFTQVPCYAVGLKSGAISIVDQRTDTCSVTCSNA
SDYCIDCLKIHHDENYITSSNWNGKINTLDMRMRRTVCSYAGHVNNSHDL
QFHFDRREHFLYAVGSDSKLRIWDIKTQELCYNEKLKTFSSSSEEHFPPV
LSFIDRWSNDESFFGMFCLNKNNGQFVPGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005860XLOC_005860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010425TCONS_00010425Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 333..374
e-value: 0.061
score: 22.4
coord: 290..330
e-value: 44.0
score: 6.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 340..383
score: 9.874
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 95..417
e-value: 8.1E-21
score: 73.6
NoneNo IPR availablePFAMPF11715Nup160coord: 353..426
e-value: 1.8E-4
score: 20.2
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 361..375
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 298..383
score: 11.155
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 104..385

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010425-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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