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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00010636-protein ID=TCONS_00010636-protein|Name=TCONS_00010636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
MHWSYICVLLVFTQFNPSHCFGDDDDHNMGRIKCTNRFEYRHQISKLVGT
CKDIIRSNPICGKNYTVAYSLHPPYVMLEDGKVSGILPTMIQYALESCCF
GCNSVKYEGPYDHFDKFYQNTDLVIPVQTSISNTEFFGHYFIHMLEIQAV
SFFGEPIKHDPDKMVRTISRSVLNTYPLFIIALVMALTAGVAIWLLDTKW
NESEFPNTFPRGPFEGFWWAFVSMTTVGYGDKSPRSVVARVFAIVWIAIG
ITMFSMYTASLTSALTNAVMASHEVVLYQKKIAVLNTTTIGQIATIKTNG
IPIQFDNVGQINKALAKNKVDAIALDENIANYYMEHLVEDAEEGQKFSLY
KRMEMSGSSYGAMAYQSNVTEFLNSFFHSNDDQRDVMAMLAMEGHGHPVQ
LDASASDSTDYFNSTRMLVLTIISLVIITIVITLVGLAIKYFTRQCMKAA
KHDNGDAMNSLMDSPITEKDLDDIVEQIHLRIKERVKQKEVNGNQYHDSA
TKL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004970 | ionotropic glutamate receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0004970 |
ionotropic glutamate receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 1.10.287.70 | | coord: 157..274
e-value: 1.9E-20
score: 71.9 |
| None | No IPR available | GENE3D | 3.40.190.10 | | coord: 275..361
e-value: 2.3E-6
score: 27.4 |
| None | No IPR available | CDD | cd00134 | PBPb | coord: 277..333
e-value: 1.93997E-6
score: 46.5974 |
| None | No IPR available | SUPERFAMILY | 53850 | Periplasmic binding protein-like II | coord: 276..337
coord: 66..162 |
| None | No IPR available | SUPERFAMILY | 81324 | Voltage-gated potassium channels | coord: 174..269 |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF | PFAM | PF00497 | SBP_bac_3 | coord: 276..352
e-value: 7.1E-6
score: 25.5 |
| IPR013099 | Potassium channel domain | PFAM | PF07885 | Ion_trans_2 | coord: 184..266
e-value: 1.8E-14
score: 53.3 |
| IPR001320 | Ionotropic glutamate receptor | PFAM | PF00060 | Lig_chan | coord: 182..271
e-value: 3.6E-8
score: 33.3 |
Blast
The following BLAST results are available for this feature:
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