TCONS_00011275-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011275-protein
Unique NameTCONS_00011275-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length604

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011275-protein ID=TCONS_00011275-protein|Name=TCONS_00011275-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MKCQQTIKSKNRLSASLAFRKEMKRKHVGKKDNPQPTLVKVKNKDLEDET
GNLGTKLSSTRSQNNEIELENHLNIKSEVESPLEIKIELQHNRNDTGGGS
ESNSENECENETENENTLNIKVELEHPMEIILELQNDSGSDSENESDSEN
ESDSSDDESESESDISRQIDNHVLPTLLPSPLKKEVIKAEHLKSSKSNDL
NSCNPDESDTDFNPEILENGEHSTEIQTKRKSEIDTEIDTEIRTSEIEKV
SQSMESQKRNKSDVNKSSNKSDSRESENGISEIGKKVQERIKQRKNVTCK
VCGKSVKDYFLDRHMKAHEKPDFKCNACGKMFSYRSKLQEHQRLHSGEKP
PRKAGKTPRKAEKSPRKAKKTHYCQFCSAKYTTSYEFKRHMKSHNGGKDI
FQCPNCGKEFSTITYFNEHERTRCGTKPYTCKICSKALFSAKSLKDHALI
HEPEKHLSCTVCGKTFPHRKNLKQHMMIHPDYNVFKCKICGEPFSILSEY
QKHVKSHLNLPIFVCKVCGKNFNREIQLKGHEKRVHGGEKPYECTVCGKR
FSLSGNLKNHLKTHDKGKGKYDTETVGGKRNGTVETSEQTITSSGKLPLK
QAKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006321XLOC_006321Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011275TCONS_00011275Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 297..318
e-value: 5.2
score: 15.8
coord: 513..536
e-value: 0.0046
score: 26.2
coord: 323..345
e-value: 8.2E-4
score: 28.7
coord: 457..479
e-value: 5.5E-5
score: 32.6
coord: 401..421
e-value: 9.3
score: 13.6
coord: 485..507
e-value: 0.0078
score: 25.4
coord: 429..451
e-value: 0.058
score: 22.5
coord: 542..564
e-value: 2.1E-4
score: 30.6
coord: 372..394
e-value: 0.11
score: 21.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 325..345
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 487..507
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 544..564
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 374..394
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 459..479
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 515..536
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 431..451
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 542..569
score: 13.131
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 323..350
score: 17.724
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 372..399
score: 10.014
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 429..456
score: 10.741
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 457..479
score: 11.385
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 513..541
score: 15.272
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 401..428
score: 12.757
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 485..507
score: 10.18
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 427..479
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 494..551
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 295..350
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 384..436
NoneNo IPR availableGENE3D3.30.160.60coord: 384..408
e-value: 1.5E-9
score: 37.5
coord: 442..468
e-value: 4.8E-15
score: 55.2
NoneNo IPR availableGENE3D3.30.160.60coord: 427..441
e-value: 1.1E-5
score: 25.0
coord: 353..383
e-value: 0.0023
score: 17.6
NoneNo IPR availableGENE3D3.30.160.60coord: 333..352
e-value: 1.2E-11
score: 44.0
NoneNo IPR availableGENE3D3.30.160.60coord: 469..496
e-value: 9.6E-14
score: 51.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 323..345
e-value: 1.3E-4
score: 22.1
coord: 513..536
e-value: 0.0028
score: 17.9
coord: 542..564
e-value: 4.4E-5
score: 23.6
coord: 485..507
e-value: 9.8E-4
score: 19.4
coord: 458..479
e-value: 3.9E-5
score: 23.8
coord: 401..422
e-value: 0.014
score: 15.7
NoneNo IPR availableGENE3D2.10.69.10coord: 497..519
e-value: 1.6E-9
score: 37.3
NoneNo IPR availableGENE3D2.20.25.10coord: 535..546
e-value: 9.2E-5
score: 21.9
NoneNo IPR availableGENE3D3.30.160.60coord: 520..534
e-value: 4.5E-8
score: 32.4
NoneNo IPR availableGENE3D3.30.160.60coord: 64..308
e-value: 0.1
score: 12.2
NoneNo IPR availableGENE3D2.20.28.30coord: 309..332
e-value: 4.0E-12
score: 45.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..604
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 547..580
e-value: 9.6E-12
score: 44.2
coord: 409..426
e-value: 3.7E-8
score: 32.8

Blast
BLAST of TCONS_00011275-protein vs. Swiss-Prot (Human)
Match: ZNF57 (Zinc finger protein 57 OS=Homo sapiens GN=ZNF57 PE=2 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 2.348e-48
Identity = 101/294 (34.35%), Postives = 150/294 (51.02%), Query Frame = 0
Query:  274 RESENGISEIGKKVQERIKQRKNVTCKVCGKS-VKDYFLDRHMKAH--EKPDFKCNACGKMFSYRSKLQEHQRLHSGEKPPRKAGKTPRKAEKSPRKAKKTHYCQFCSAKYTTSYEFKRHMKSHNGGKDIFQCPNCGKEFSTITYFNEHERTRCGTKPYTCKICSKALFSAKSLKDHALIHEPEKHLSCTVCGKTFPHRKNLKQHMMIHPDYNVFKCKICGEPFSILSEYQKHVKSHLNLPIFVCKVCGKNFNREIQLKGHEKRVHGGEKPYECTVCGKRFSLSGNLKNHLKTH 564
            R + NG +   + V+   K R    C+ CG++ +      RHM  H  EKP +KC  CGK F+Y    Q H++ H+GEKP                     + C+ C   ++ S   + HM+ H G K +++C +CGK F++   F  H RT  G KPY CK C KA   + + ++H  IH  E+   C  CGK F   ++ + H+  H     ++CK CG+ F+  S +++HV+ H    +  C+ CGK F      +GH  R+H GEKPYEC  CGK F+ S  L NH++ H
Sbjct:  230 RMAFNGFASFTRHVRTHTKDRP-YKCQECGRAFIYPSTFQRHMTTHTGEKP-YKCQHCGKAFTYPQAFQRHEKTHTGEKP---------------------YECKQCGKTFSWSETLRVHMRIHTGDK-LYKCEHCGKAFTSSRSFQGHLRTHTGEKPYECKQCGKAFTWSSTFREHVRIHTQEQLYKCEQCGKAFTSSRSFRGHLRTHTGEKPYECKQCGKTFTWSSTFREHVRIHTQEQLHKCEHCGKAFTSSRAFQGH-LRMHTGEKPYECKQCGKTFTWSSTLHNHVRMH 498          

HSP 2 Score: 156.377 bits (394), Expect = 6.391e-41
Identity = 88/265 (33.21%), Postives = 135/265 (50.94%), Query Frame = 0
Query:  314 HMKAHEKPD-----FKCNACGKMFSYRSKLQEHQRLHSGEKPPR-KAGKTPRKAEKSPRKAKKTHY------CQFCSAKYTTSYEFKRHMKSHNGGKDIFQCPNCGKEFSTITYFNEHERTRCGTKPYTCKICSKALFSAKSLKDHALIHEPEKHLSCTVCGKTFPHRKNLKQHMMIHPDYNVFKCKICGEPFSILSEYQKHVKSHLNLPIFVCKVCGKNFNREIQLKGHEKRVHGGEKPYECTVCGKRFSLSGNLKNHLKTHDK 566
            H+ +H + D     +KC ACG+ F +   L  H + H+ EK  + +  +       S  +  +TH       CQ C   +     F+RHM +H G K  ++C +CGK F+    F  HE+T  G KPY CK C K    +++L+ H  IH  +K   C  CGK F   ++ + H+  H     ++CK CG+ F+  S +++HV+ H    ++ C+ CGK F      +GH  R H GEKPYEC  CGK F+ S   + H++ H +
Sbjct:  182 HLHSHGRTDTEEKPYKCQACGQTFQHPRYLSHHVKTHTAEKTYKCEQCRMAFNGFASFTRHVRTHTKDRPYKCQECGRAFIYPSTFQRHMTTHTGEKP-YKCQHCGKAFTYPQAFQRHEKTHTGEKPYECKQCGKTFSWSETLRVHMRIHTGDKLYKCEHCGKAFTSSRSFQGHLRTHTGEKPYECKQCGKAFTWSSTFREHVRIHTQEQLYKCEQCGKAFTSSRSFRGH-LRTHTGEKPYECKQCGKTFTWSSTFREHVRIHTQ 444          

HSP 3 Score: 111.309 bits (277), Expect = 1.076e-25
Identity = 74/239 (30.96%), Postives = 114/239 (47.70%), Query Frame = 0
Query:  299 CKVCGKSVK-DYFLDRHMKAHEKPD-FKCNACGKMFSYRSKLQEHQRLHSGEKPP--RKAGKTPRKAEKSPRKAK-----KTHYCQFCSAKYTTSYEFKRHMKSHNGGKDIFQCPNCGKEFSTITYFNEHERTRCGTKPYTCKICSKALFSAKSLKDHALIHEPEKHLSCTVCGKTFPHRKNLKQHMMIHPDYNVFKCKICGEPFSILSEYQKHVKSHLNLPIFVCKVCGKNFNREIQL 528
            CK CGK+      L  HM+ H     +KC  CGK F+     Q H R H+GEKP   ++ GK    +       +     + + C+ C   +T+S  F+ H+++H G K  ++C  CGK F+  + F EH R     + + C+ C KA  S+++ + H  +H  EK   C  CGKTF     L  H+ +H      KCK CG  F   S ++ H++ H       C+   K F+ ++ L
Sbjct:  310 CKQCGKTFSWSETLRVHMRIHTGDKLYKCEHCGKAFTSSRSFQGHLRTHTGEKPYECKQCGKAFTWSSTFREHVRIHTQEQLYKCEQCGKAFTSSRSFRGHLRTHTGEKP-YECKQCGKTFTWSSTFREHVRIHTQEQLHKCEHCGKAFTSSRAFQGHLRMHTGEKPYECKQCGKTFTWSSTLHNHVRMHTGEKPHKCKQCGMSFKWHSSFRNHLRMHTGQKSHECQSYSKAFSCQVIL 547          

HSP 4 Score: 103.605 bits (257), Expect = 2.941e-23
Identity = 72/228 (31.58%), Postives = 99/228 (43.42%), Query Frame = 0
Query:  374 CQFCSAKYTTSYEFKRHMKSHNGGKDIFQCPN--CGKEFSTITYFNEHERTRCGTKPYTCKICSKALFSAKSLKDHALIHEPEKHLSCTVCGKTFPHRKNLKQHMMIHPDYNVFKCKICGEPFSILSEYQKHVKSHLNLPIFVCKVCGKNFNREIQLKGHEKRVHGGEKPYECTVCGKRFSLSGNLKNHLKTHDKGKGKYDTETVGGKRNGTVETSEQTITSSGKLPL 599
            C  C   +T     KRH+KSH G K     P   C +     ++ + H RT    KPY C+ C +     + L  H   H  EK   C  C   F    +  +H+  H     +KC+ CG  F   S +Q+H+ +H     + C+ CGK F      + HEK  H GEKPYEC  CGK FS S  L+ H++ H  G   Y  E  G     +        T +G+ P 
Sbjct:  142 CTKCRTVFTHLSSLKRHVKSHCGRKAP---PGEECKQACICPSHLHSHGRTDTEEKPYKCQACGQTFQHPRYLSHHVKTHTAEKTYKCEQCRMAFNGFASFTRHVRTHTKDRPYKCQECGRAFIYPSTFQRHMTTHTGEKPYKCQHCGKAFTYPQAFQRHEK-THTGEKPYECKQCGKTFSWSETLRVHMRIHT-GDKLYKCEHCGKAFTSSRSFQGHLRTHTGEKPY 364          
The following BLAST results are available for this feature:
BLAST of TCONS_00011275-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF572.348e-4834.35Zinc finger protein 57 OS=Homo sapiens GN=ZNF57 PE... [more]
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