TCONS_00011315-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011315-protein
Unique NameTCONS_00011315-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011315-protein ID=TCONS_00011315-protein|Name=TCONS_00011315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MAAVTAGRRFLKSVVRDKSLLTTRCLSTSLSQAATQQLTVRDALNMAMEE
EITRDDRVFLLGEEVAQYDGAYKVSRGLWKKHGEKRIVDTPISEIGFAGI
ATGAAMAGLRPICEFMTFNFAMQAIDHIINSAAKTFYMSAGEVNVPIVFR
GPNGASAGVAAQHSQCYAAWYGHVPGLKVISPWSAEDCKGLLKAAIRDND
PVVFLENEIMYGRSFEVDDKVMDPDFILPIGKAKVEREGTDVTIVAHSLG
VQKAMESAEILEKEGINCEIVNLRTIRPLDKDAIIKSVKKTNRLITVEGG
FPQYGVGAEVCAVVMESEAFDHLDAPIYRVTGADIPTPYANNLEVLSLPQ
PENVIRTIRKVLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006340XLOC_006340Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011315TCONS_00011315Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR033248Transketolase_C
IPR009014Transketo_C/PFOR_II
IPR029061THDP-binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 38..213
e-value: 1.0E-56
score: 204.4
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 37..211
e-value: 2.2E-46
score: 157.7
NoneNo IPR availableGENE3D3.40.50.970coord: 34..231
e-value: 1.8E-81
score: 271.6
NoneNo IPR availableCDDcd07036TPP_PYR_E1-PDHc-beta_likecoord: 42..208
e-value: 1.59466E-105
score: 309.023
IPR033248Transketolase, C-terminal domainPFAMPF02780Transketolase_Ccoord: 231..354
e-value: 4.6E-40
score: 136.3
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIGENE3D3.40.50.920coord: 232..363
e-value: 1.5E-45
score: 154.2
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IISUPERFAMILY52922TK C-terminal domain-likecoord: 228..362
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 37..217

Blast
[Close]
BLAST of TCONS_00011315-protein vs. Swiss-Prot (Human)
Match: ODPB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3)

HSP 1 Score: 495.352 bits (1274), Expect = 6.408e-177
Identity = 238/363 (65.56%), Postives = 291/363 (80.17%), Query Frame = 0 
Query:    1 MAAVTA-GRRFLKSVVRDKSLLTTRCLSTSLSQAATQQLTVRDALNMAMEEEITRDDRVFLLGEEVAQYDGAYKVSRGLWKKHGEKRIVDTPISEIGFAGIATGAAMAGLRPICEFMTFNFAMQAIDHIINSAAKTFYMSAGEVNVPIVFRGPNGASAGVAAQHSQCYAAWYGHVPGLKVISPWSAEDCKGLLKAAIRDNDPVVFLENEIMYGRSFEVDDKVMDPDFILPIGKAKVEREGTDVTIVAHSLGVQKAMESAEILEKEGINCEIVNLRTIRPLDKDAIIKSVKKTNRLITVEGGFPQYGVGAEVCAVVMESEAFDHLDAPIYRVTGADIPTPYANNLEVLSLPQPENVIRTIRKVL 362
            MAAV+   RR L+ V     LL  R   T+    A  Q+TVRDA+N  M+EE+ RD++VFLLGEEVAQYDGAYKVSRGLWKK+G+KRI+DTPISE+GFAGIA GAAMAGLRPICEFMTFNF+MQAID +INSAAKT+YMS G   VPIVFRGPNGASAGVAAQHSQC+AAWYGH PGLKV+SPW++ED KGL+K+AIRDN+PVV LENE+MYG  FE   +    DF++PIGKAK+ER+GT +T+V+HS  V   +E+A +L KEG+ CE++N+RTIRP+D + I  SV KTN L+TVEGG+PQ+GVGAE+CA +ME  AF+ LDAP  RVTGAD+P PYA  LE  S+PQ +++I  I+K L
Sbjct:    1 MAAVSGLVRRPLREV---SGLLKRRFHWTA---PAALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL 357
The following BLAST results are available for this feature:
BLAST of TCONS_00011315-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODPB6.408e-17765.56Pyruvate dehydrogenase E1 component subunit beta, ... [more]
back to top