TCONS_00011500-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011500-protein
Unique Name	TCONS_00011500-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1444

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011500-protein ID=TCONS_00011500-protein|Name=TCONS_00011500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1444bp
FRLSRNSWKMSNAKQKKDRGSVPSVDQIQSDILTKYAHDHWANKKENTSK
YDAKIISNIYKTELKANNFPTKRIMLLEFSQYLENYLWKHFSGKESTDEH
MMSICILVNEKCRERVPPWEAFRKSPEEFESFFQRVLKKIIDTQAKISVK
ERTILLVFLVRCFNSLEVDIIREQVQKLISLPMWSSLLPGRLEQELKSVP
KYKKYWNILKKKDGKCDGDTLERLKFERSFLTKLTNLFFVFLKTVPEEGD
VSSDIVIFCERFIELMVDLESLLPTRRFFNVVIDNHHVVVTCQLSNLAKH
PKGKLFNQLVDMLKFYTGFEINDHTGESLTDYDMTEAHYDKITSLQRAVF
KNYKSDGSTFAMSNVASVDTRETLYKQLKKFSTKKLHNIAAYLNLIPNLK
EMPEGEKYDKTFIIELLISKHERRPSQIQILNKKPLYPTEEVLWDENIVP
SQYYSGEGCLALPKLNLQFLTLHDYLLRNHNLFQLESTYEIRSDVEDSIG
RLKPWTNEYNETMFDGWARMAVVINGFSIFEVGKPKVGETCPSRVKADIK
ISLSTRQMLRLEWESLRKHDVCFLITIRAKKTHTNMGYDRKQPFAEQYGI
QYIRGCEIEGMLDEEGHVIEEGPDPKPILKGNDRTYRVWMDCNQYEVDMK
KTNTGSEDIYETFNVFMRRKPKENNFKAVLETIRDLMNTECLVPSWIHDI
FLGYDDPSAANYKNLDNQITDLDFVDTFLDMDHLKASFPDYKIQCDQEVE
AQRPPFRISFPAKPAPAPQTKTSRKRKAEEETPITNIKTNEDENVLKIEP
YVIPNRGPYPYNQPKMNAVPFTPTQVEAIKSGMQPGLTMVVGPPGTGKTD
VAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGH
GEESLETEKDFSRYGRVNFVLARRMHLLEEVQRLQQSLGVPGDMSYTCET
AGHFYLYQVIARWEEYQSRLKKKPDDMEAISEYFPFKVYFLNAPLPLFKG
KSYEEDREIAEGCYRHIKKIFTELDEYRAFELLRNGRDRSKYLLIKTAKI
IAMTCTHAALRRRDLVELGFKYDNVLMEEAAQILEIETFVPLMLQTPEDG
YNRLKRVILIGDHHQLPPVIKNMAFQKFSNMEQSLFTRFVRLGVPYVQLD
AQGRARPSICSLYSWRYQKLGNLSHVVTRPKFKAANPGLFYDYQLINVEN
FNGVGESEPNPFFYQNLGEAEYCVALFMYMRLLGYPASSISILTTYNGQK
HLIRDVIDKRCGENPIIGRPHKVTTVDRYQGQQNDYIILSLVRTKTVGHL
RDVRRLIVAMSRARLGLYVFARVSLFQNCFELRPAFSQLMARPMNLFLAP
DEKYPSQRPINVLPSGKPFILNDMPQMAQYVYDIYSQRVQEMERLEKLKK
SQPKSEPKSEPKSDDKKPDSGDQKNASQTKVEKQQMIVNEVEMN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006439	XLOC_006439	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011500	TCONS_00011500	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032174	Aquarius_N
IPR026300	CWF11_fam
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0005681	spliceosomal complex

Vocabulary: **Biological Process**
Term	Definition
GO:0000398	mRNA splicing, via spliceosome

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032174	Intron-binding protein aquarius, N-terminal	PFAM	PF16399	Aquarius_N	coord: 29..821 e-value: 0.0 score: 1037.9
None	No IPR available	PFAM	PF13086	AAA_11	coord: 824..1122 e-value: 1.9E-29 score: 103.1
None	No IPR available	PFAM	PF13087	AAA_12	coord: 1131..1321 e-value: 1.0E-27 score: 96.9
None	No IPR available	GENE3D	3.40.50.300		coord: 1160..1342 e-value: 1.4E-19 score: 69.9
None	No IPR available	GENE3D	3.40.50.300		coord: 815..1159 e-value: 5.4E-27 score: 93.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 758..781
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1395..1444
IPR026300	CWF11 family	PIRSF	PIRSF038901	AQR_cwf11	coord: 11..1444 e-value: 0.0 score: 2019.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 819..936 coord: 1022..1320

Blast

[Close]

BLAST of TCONS_00011500-protein vs. Swiss-Prot (Human)
Match: AQR (Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4)

HSP 1 Score: 1874.37 bits (4854), Expect = 0.000e+0
Identity = 893/1376 (64.90%), Postives = 1100/1376 (79.94%), Query Frame = 0

Query:   22 VPSVDQIQSDILTKYAHDHWANKKENTSKYDAKIISNIYKTELKANNFPTKRIMLLEFSQYLENYLWKHFSGKESTDEHMMSICILVNEKCRERVPPWEAFRKSPEEFESFFQRVLKKII-DTQAKISVKERTILLVFLVRCFNSLEVDIIREQVQKLISLPMWSSLLPGRLEQELKSVPKYKKYWNILKKKDGKCDGDTLERLKFERSFLTKLTNLFFVFLKTVPEEGDVSSDIVIFCERFIELMVDLESLLPTRRFFNVVIDNHHVVVTCQLSNLAKHPK-GKLFNQLVDMLKFYTGFEINDHTGESLTDYDMTEAHYDKITSLQRAVFKNYKSDGSTFAMSNVASVDTRETLYKQLKKFSTKKLHNIAAYLNLIPNLKEMPEGEKYDKTFIIELLISKHERRPSQIQILNKKPLYPTEEVLWDENIVPSQYYSGEGCLALPKLNLQFLTLHDYLLRNHNLFQLESTYEIRSDVEDSIGRLKPWTNEYNETMFDGWARMAVVINGFSIFEVGKPKVGETCPSRVKADIKISLSTRQMLRLEWESLRKHDVCFLITIRAKKTHTNMGYDRKQPFAEQYGIQYIRGCEIEGMLDEEGHVIEEGPDPKPILKGNDRTYRVWMDCNQYEVDMKKT-NTGSEDIYETFNVFMRRKPKENNFKAVLETIRDLMNTECLVPSWIHDIFLGYDDPSAANYKNLDNQITDLDFVDTFLDMDHLKASFPDYKIQCDQEVEA-QRPPFRISFPAKPAPAPQTKTSRKRKAEEETPITNIKTNEDENVLKIEPYVIPNRGPYPYNQPKMNAVPFTPTQVEAIKSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEESLETEKDFSRYGRVNFVLARRMHLLEEVQRLQQSLGVPGDMSYTCETAGHFYLYQVIARWEEYQSRLKKKPD---DMEAISEYFPFKVYFLNAPLPLFKGKSYEEDREIAEGCYRHIKKIFTELDEYRAFELLRNGRDRSKYLLIKTAKIIAMTCTHAALRRRDLVELGFKYDNVLMEEAAQILEIETFVPLMLQTPEDGYNRLKRVILIGDHHQLPPVIKNMAFQKFSNMEQSLFTRFVRLGVPYVQLDAQGRARPSICSLYSWRYQKLGNLSHVVTRPKFKAANPGLFYDYQLINVENFNGVGESEPNPFFYQNLGEAEYCVALFMYMRLLGYPASSISILTTYNGQKHLIRDVIDKRCGENPIIGRPHKVTTVDRYQGQQNDYIILSLVRTKTVGHLRDVRRLIVAMSRARLGLYVFARVSLFQNCFELRPAFSQLMARPMNLFLAPDEKYPSQRPINVLPSGKPFILNDMPQMAQYVYDIYSQRVQ 1390
             P+V QI ++ +T+ A  +WA   +  S +D K+I +IY+ E+  + F  ++IMLLEFSQYLENYLW ++S + S+  ++MSIC +VNEK RE VP WE F+K P+ F  FF+ +LK  + +T  + S+ E+T+LL+FL  CFNSLEVD+IR QVQ+LISLPMW  L   RLE ELK  PK +K+WN++KK D K D +  E+   ER FL++L   F   LK+VP    V+ D V +CERFIELM+DLE+LLPTRR+FN ++D+ H++V C LSNL +  + G LF+QL+DMLKFYTGFEIND TG +LT+ +MT  HYD+ITSLQRA F ++  +   FA+SNVA VDTRE+L K     S+  LH +A+YL L+P L +  E   +DK F++ELL+S+HERR SQIQ LN+ PLYPTE+++WDENIVP++YYSGEGCLALPKLNLQFLTLHDYLLRN NLF+LESTYEIR D+EDS+ R+KPW +EY   +F GWARMA  I  F++ EV KP +GE  P+RV+AD+ I+L+ R  ++ EWE LRKHDVCFLIT+R  K +    +DR++PF EQ G+ Y+RGCEI+GMLD++G VIE+GP+P+P L+G  RT+RV++D NQY+ DM  T   G+ED+YETFN+ MRRKPKENNFKAVLETIR+LMNT+C+VP W+HDI LGY DPS+A+Y  + NQI  LDF DTFL ++HLKASFP + ++   E  A Q PPFRI+FP +       K  +++ A+ E   T     E+   L +EP+VIPNRGPYPYNQPK N + FT TQ+EAI++GMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEE LETEKDFSRYGRVN+VLARR+ LLEEV+RLQ+SLGVPGD SYTCETAG+F+LYQV++RWEEY S++K K     D+  +S +FPF  YF NAP P+FKG+SYEED EIAEGC+RHIKKIFT+L+E+RA ELLR+G DRSKYLL+K AKIIAMTCTHAAL+R DLV+LGFKYDN+LMEEAAQILEIETF+PL+LQ P+DG++RLKR I+IGDHHQLPPVIKNMAFQK+SNMEQSLFTRFVR+GVP V LDAQGRAR S+C+LY+WRY+ LGNL HV   P+F  AN GL YD+QLINVE+F GVGESEPNP+FYQNLGEAEY VALFMYM LLGYPA  ISILTTYNGQKHLIRD+I++RCG NP+IGRP+KVTTVDR+QGQQNDYI+LSLVRT+ VGHLRDVRRL+VAMSRARLGLY+FARVSLFQNCFEL PAFSQL ARP++L + P E +P+ R     PS +  I+ +MPQMA +VY++Y   +Q
Sbjct:   12 APTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFPFFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQLARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSEPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHF-PELYDFALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKN-EDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPY-GTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSG-----KGKKRKDADVEDEDT-----EEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQ 1374

The following BLAST results are available for this feature:

BLAST of TCONS_00011500-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011500-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AQR	0.000e+0	64.90	Intron-binding protein aquarius OS=Homo sapiens GN...	[more]

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TCONS_00011500-protein (polypeptide) - C. hemisphaerica