Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011656-protein ID=TCONS_00011656-protein|Name=TCONS_00011656-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1810bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00011656-protein vs. Swiss-Prot (Human)
Match: PTPRD (Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2) HSP 1 Score: 766.148 bits (1977), Expect = 0.000e+0 Identity = 546/1654 (33.01%), Postives = 833/1654 (50.36%), Query Frame = 0 Query: 231 SSTQIDLSWDEPPFESQNGQIISYNIQVIRDNQTEKSLNTTEQF----YDVTNLRKFTNYTFLVSASNEIGEGP-SAMATKQTLPDLPDTAPTNLTAQALSSTNIQIHWIAPPIKSINGIFEMYTIRVRLQSESSIEQFL--NTTDT-FYNVTNLSIFKEYTFEVRLKNEIGEGP---EIEATFKTLPDIPSIVRNFTCFETLQNSITLTWAKPDNPNGIIENYRISRTDSEESEVEEL--DGKTSEKTFTMLHPYRLYNFTIQARTSAGYG-TIAEVTCMTKESKPDVP-DNLRTGVVSSYWFTLLWNAPL--KVHGIINSYHLEIRSERRNEPFREELNGEKIQTNMMFNMSFGVTPY--------TRYACYVTAQTSIGKG-QPANVNLTTQQAAPS-PVRALTASDIGATSIRLSWVKP---EYENGIVLYRVFQIETDSDD---QVSIGDGLVQTGFF----------VEKGIQPYTEYNFSVQAYTLGGGDSELETITVRSDSAIPGVPTILELSALSNSSISVTWRFLTESEGNGIVNQYTIRVHQNEIKILDKPYEVEEGVTRTNATVVITGLSPWTEYRFSIAARNDKGMGEFSQYREIKTLPGTP-GKPQSLKVSNISNVEDDLKKVRIEWKAPL--QPNGEIKSYKIFIYQKGFDT-PFKVFTDEKSTSKEVGGLEPFTRFVVEVQAFNSI----FGPKARLNFITISAAPSGPPKSFTAVEKDFTPNSIKLQWKPPTKPNGIITNYFISYDKGKDSIITYVDGNKQTTNIEDLKPFTSYTFAIKCKSTGGEGPLSDGVTART----LATDPVIPSVTPKPILGSSETTITIQM-WTPNDENGRINFYYIVVLDSAE------KPRKLPNEYTDEELRDQTYQLYLEAKNADKTEFKPYITASLSRDEFSKLKNGTFVIGQSQQQSRFLFNVPKYDNGPLSEGRSYHYFIRA---HISQDLYVSSPDWRSTKTTGGETKGSGTGDEGSNLAGPIAGTFVAIIVVLVLAIGFVYYRRRQQMGGTTVSKKMDELDGGAENKGYIDDPVHLP---------AAHP-VKVENYQAYVRNLAKDGKYLFSEEFKMILRGRSGYNCLYEHSNHPINRDKNRYNNIAAYDHTRVLLEPLEGIPESDYINANYIDGYMEQAAYIACQGPLEGTCEDMWRMCWEKNVSTIVMLTQCVENGRDKCYHYWPEVGTKCYGSMEVTLTESTFLPVYSMRTFSLLNDQYPGSEKF-VRHFAFCAWPDHGTP-NAQQLLTFIRRVNQCHQQNSGPIIVHCSAGVGRTGTYIVMDVNLKRIKTEQNIEIYNYLQHIRSQRNHMVQTESQYVFIHDALLEYLTFGTTEINVRDLRDYVKKLQQTVDSGMETHLDKEFQKLNHFDQSGMKSMNAANSSYNKAKNRFLNVLPYDDTRVSLTHLPGIPGSDYINANYVNGYNMSKLFIATQAPLPQTIPAFWRLVWEHQCMTIVCLAQETENGKVKIHRYWPSIEAAMHGTLMIENIDEQVHNEYIVRDFKVTHTTDGLSRKIRHFQYTAWPDNAYPESGSGFVDMIGQVQKWHQQ-NEIGQIVVHCSAGVGRTGVFIGLCNLIERVKIEGYVDVFQVVREMRTQRPAMVQTKVQYLFCYLALQDFLASFDIY 1806 ++T I L+WD S N + +SY I + +E+ + Y V L +++Y F V A N IG GP S QT P +AP ++ A+ LSST I + W P + NG + Y + + + ++ N D+ + NL K Y+ +V IG+GP +I+ +T +P NF + SI L+W P + I NY + D E E + + + TS + L P LY F + AR+ G G + AE++ T +SKP P ++ SS + W P K +GII Y ++ + ++GE + + + + T Y T Y VTA T +G G + +V + T + PS P R + + +TS+++SW P + I Y+V + ++ + Q + D ++ + + G+QP T Y+ +V AYT G + + V + A+PG P ++ N+++ + W ++ G + Y ++ + +++ L E E AT + G S Y F ++ARN G GE +EI P G PQ+L ++ V++ W+ P+ + NG I Y + P + T+ + GL+P T + V+V+A S + P + + + + K+F K S+ L W+ P N + + I YD GK ++ VDG I +LKP SY+F + + G L VTA+T L T P T + + IT+Q+ P +EN I YYI+++ + KP + P+E +EL + + + + E KPYI A F L F +G + F N L G+ Y +F+ A H +Y +SP S + DE L + G +A++ ++ + I + Y+R++ + S+K + + DPV L A+HP + + ++ L + FS+E++ I G +EHSN +N+ KNRY N+ AYDH+RVLL +EGIP SDY+NANYIDGY +Q AYIA QG L T D WRM WE+ +T+VM+T+ E R KC YWP GT+ +G ++VTL ++ L Y +RTF+L + SEK VR F F AWPDHG P + L F+RRV C+ ++GP++VHCSAGVGRTG +IV+D L+RIK E+ ++IY ++ +R+QRN+MVQTE QY+FIHDALLE +T G TE+ R+L Y++KL Q T ++ EF++L ++ +AN NK KNR +N++PY+ TRV L + G+ GSDYINA++++GY K +IATQ PL +T FWR++WEH +V L + E G+ K H+YWP+ +A + +++ + E +YI+R+FKVT DG SR +R FQ+T WP+ P+SG GF+D IGQV K +Q + G I VHCSAGVGRTGVFI L ++ER++ EG VD+FQ V+ +RTQRPAMVQT+ QY F Y A ++L SFD Y Sbjct: 335 TATSITLTWD-----SGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQT--GVPGQPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEHGEEQRITIEPGTSYR-LQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSIKYTA----------VDGEDDKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTAL-IQWHPPVDTFGP--LQGYRLKFGRKDMEPLTT-LEFSEKEDHFTATDIHKGAS----YVFRLSARNKVGFGE-EMVKEISIPEEVPTGFPQNLHSEGTTST-----SVQLSWQPPVLAERNGIITKYTLLYRDINIPLLPMEQLIVPADTTMTLTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQVFA---KNFHV--KAVMKTSVLLSWEIPENYNSAMP-FKILYDDGK--MVEEVDGRATQKLIVNLKPEKSYSFVLTNRGNSAGG-LQHRVTAKTAPDVLRTKPAFIGKT------NLDGMITVQLPEVPANEN--IKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAA-----HFDVLPT-EFTLGDDKHYGGFT-------NKQLQSGQEYVFFVLAVMEHAESKMYATSP--YSDPVVSMDLDPQPITDEEEGLIW-VVGPVLAVVFIICIVIAILLYKRKR---AESDSRKSSIPNNKEIPSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESI---DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNG--SSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLAS-SKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFSYRAALEYLGSFDHY 1910 HSP 2 Score: 99.3673 bits (246), Expect = 1.407e-20 Identity = 110/391 (28.13%), Postives = 187/391 (47.83%), Query Frame = 0 Query: 672 NFSVQAYTLGGGDSELETITVRSDSAIPGVPTILELSALSNSSISVTWRFLTESEGNGIVNQYTIRVHQNEIKILDKPYEVEEGVTRTNATVVITGLSPWTEYRFSIAARNDKGMGEFSQYREIKTLPGTP-GKPQSLKVSNISNVEDDLKKVRIEWKAPLQPNGEIKSYKIFIYQKGFDTPFKVFTDEKSTSK--EVGGLEPFTRFVVEVQAFNSIF-GP-KARLNFITISAAPSGPPKSFTAVEKDFTPNSIKLQWKPPTKPNGIITNYFISY---DKGKDSIITYVDGNKQTTNIEDLKPFTSYTFAIKCKSTGGEGPLSDGVTARTLATDPVIPSVTPKPILGSSETTITIQM-WTP---NDENGRINFY---YIVVLDSAEKPRKL 1047 N++ A + G + ITV++ PG P + E +A +SI++TW +S V+ Y I Q++ K ++ Y+ +GV T +V GLSP+++Y F + A N+ G G S+ +T P P+ ++ +S+ + ++WK P +PNG+I+ Y+++ + S+ +G L P + V+V AF SI GP + + IT + P G P +F A + T SI L W PP + I NY + Y + G++ IT G + ++ LKP + Y F + +S G G + ++ART+ + P P P+ I +S ++ +I + W P +NG I Y Y V +KP ++ Sbjct: 299 NYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTA---TSITLTW----DSGNPEPVSYYII---QHKPKNSEELYKEIDGVATTRYSVA--GLSPYSDYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSST-----TILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVP-GQPLNFKAEPESET--SILLSWTPPR--SDTIANYELVYKDGEHGEEQRITIEPGT--SYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAP---PQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEI 662 The following BLAST results are available for this feature:
BLAST of TCONS_00011656-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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