TCONS_00011659-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011659-protein
Unique NameTCONS_00011659-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011659-protein ID=TCONS_00011659-protein|Name=TCONS_00011659-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
ANKTNTLISLFYFFIKVTVKGQLLIKYETKMFLMILNYNGCIIEHCLEDH
SSRMAKPRSSSPVSYISSSSEDDIQLNDKNTPTQAQQTLKSQITSVDPMV
LPEIEEQAKIASKSIDRLMKFLSKELTEGTKATTDIVSVYDGTIDHVHSE
VEQNIKAMYGLIAKCEELDRKMKPINELASQVRNIRETLDQLENICK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006541XLOC_006541Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011659TCONS_00011659Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019314BORCS6
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..83
IPR019314BLOC-1-related complex subunit 6PFAMPF10157BORCS6coord: 58..194
e-value: 3.2E-31
score: 108.5

Blast
[Close]
BLAST of TCONS_00011659-protein vs. Swiss-Prot (Human)
Match: BORC6 (BLOC-1-related complex subunit 6 OS=Homo sapiens GN=BORCS6 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.163e-19
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:   96 VDPMVLPEIEEQAKIASKSIDRLMKFLSKELTEGTKATTDIVSVYDGTIDHVHSEVEQNIKAMYGLIAKCEELDRKMKPINELASQVRNIRETLDQLENICK 197
            +DP VL ++E  ++     +DRL++ L   + E T  +   +  Y   +D +   V+ +IK MY L+A+CEEL+R ++P+  LA QVR+IR TL+ LE +CK
Sbjct:  256 IDPEVLRDLERLSRELGGRVDRLLRGLGGAVQELTALSVGCIQTYRDAVDSLGEAVDMSIKGMYTLLARCEELERALQPVQGLARQVRDIRRTLEVLEALCK 357
The following BLAST results are available for this feature:
BLAST of TCONS_00011659-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BORC61.163e-1938.24BLOC-1-related complex subunit 6 OS=Homo sapiens G... [more]
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