TCONS_00011672-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011672-protein
Unique NameTCONS_00011672-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011672-protein ID=TCONS_00011672-protein|Name=TCONS_00011672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MAAVEVMATYPSDRNKLIAEKKEKVVVKTIQMEVEDSKSHEGLQQYYITK
IEESKMEVADKVKDLRRLEAQRNELNAKVRMLREELQLLQEQGSYVGEVV
KPMDKKKVLVKVHPEGKYVVDLDKGIEMTQISANLRVALRNDSYTLHKIL
PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEA
LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG
SRMVRELFVLAREHSPSIIFMDEIDSIGSARIESGGSGGGDSEVQRTMLE
LLNQLDGFEPTQNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPNEDAR
ADILRIHSRKMNLTRGINLKKIAETMPGSSGAEIKGVCTEAGMYALRERR
VHVTQEDFEMAVAKVMQKDNEKNMSIKKLWK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006550XLOC_006550Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011672TCONS_00011672Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR00593726S_Psome_P45
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..92
NoneNo IPR availableGENE3D3.40.50.300coord: 151..360
e-value: 1.7E-60
score: 204.0
NoneNo IPR availableGENE3D1.10.8.60coord: 361..420
e-value: 2.7E-23
score: 81.3
NoneNo IPR availableCDDcd00009AAAcoord: 175..343
e-value: 8.31169E-28
score: 106.461
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 205..346
e-value: 2.0E-23
score: 93.8
IPR00593726S proteasome subunit P45TIGRFAMTIGR01242TIGR01242coord: 57..416
e-value: 5.4E-135
score: 448.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 209..343
e-value: 5.1E-42
score: 143.3
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 314..332
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 162..414

Blast
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BLAST of TCONS_00011672-protein vs. Swiss-Prot (Human)
Match: PRS8 (26S proteasome regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 692.189 bits (1785), Expect = 0.000e+0
Identity = 347/401 (86.53%), Postives = 380/401 (94.76%), Query Frame = 0 
Query:   31 QMEVEDSKSHEGLQQYYITKIEESKMEVADKVKDLRRLEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKYVVDLDKGIEMTQISANLRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVLAREHSPSIIFMDEIDSIGSARIESGGSGGGDSEVQRTMLELLNQLDGFEPTQNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPNEDARADILRIHSRKMNLTRGINLKKIAETMPGSSGAEIKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDNEKNMSIKKLWK 431
            QME+E+ K+  GL+QYY++KIEE ++ V DK ++LRRL+AQRNELNAKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGK+VVD+DK I++  ++ N RVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFV+AREH+PSIIFMDEIDSIGS+R+E  G  GGDSEVQRTMLELLNQLDGFE T+NIKVIMATNRIDILDSALLRPGRIDRKIEFP PNE+AR DIL+IHSRKMNLTRGINL+KIAE MPG+SGAE+KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD+EKNMSIKKLWK
Sbjct:    8 QMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE--GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
The following BLAST results are available for this feature:
BLAST of TCONS_00011672-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS80.000e+086.5326S proteasome regulatory subunit 8 OS=Homo sapien... [more]
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