TCONS_00011745-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011745-protein
Unique NameTCONS_00011745-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011745-protein ID=TCONS_00011745-protein|Name=TCONS_00011745-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MGMLXLKSVTCPDSVSNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCC
PSGYTCSKGFCTQSLTKEANKIVIAQLRSVECPDGMSECPSGNTCCKLSS
GQWGCCPLPKATCCSDGVHCCPNGYNCNSGTCTKGNEVIKASLKTKAISL
TNVACPDGQSECPSGNTCCKLSSGGYGCCPLPKAXVEIPAVNCHLVDTVA
VLCLKPHVVLMEFIAVQMDIAATVAFVKRAMRGSRLPQRKLPLN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006599XLOC_006599Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011745TCONS_00011745Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000118Granulin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000118GranulinSMARTSM00277GRAN_2coord: 11..61
e-value: 3.6E-20
score: 83.0
coord: 155..203
e-value: 0.0033
score: 15.4
coord: 82..132
e-value: 3.9E-21
score: 86.2
IPR000118GranulinPFAMPF00396Granulincoord: 94..132
e-value: 2.8E-15
score: 56.3
coord: 167..184
e-value: 1.8E-4
score: 21.7
coord: 23..59
e-value: 8.6E-15
score: 54.7
IPR000118GranulinPROSITEPS00799GRANULINScoord: 114..127
IPR000118GranulinPROSITEPS00799GRANULINScoord: 43..56
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 154..183
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 82..110
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 10..38

Blast
BLAST of TCONS_00011745-protein vs. Swiss-Prot (Human)
Match: GRN (Granulins OS=Homo sapiens GN=GRN PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.917e-42
Identity = 86/190 (45.26%), Postives = 110/190 (57.89%), Query Frame = 0
Query:   13 DSVSNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCCPSGYTC--SKGFCTQS------LTKEANKIVI----AQLRSVECPDGMSECPSGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYNC-NSGTCTKGNEVIKASLKTKAISLT-----NVACPDGQSECPSGNTCCKLSSGGYGCCPLPKA 184
            D   +CPDG TCC+L SG WGCCP   AVCC D +HCCP+G+TC   KG C Q       + K    + +    A  R V C D +S CPS +TCC+L+SG+WGCCP+P+A CCSD  HCCP GY C   G C +G+E++    K  A   +     ++ C D  + CP G TCC    G + CC LP A
Sbjct:  285 DMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPC-DNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGC-DQHTSCPVGQTCCPSLGGSWACCQLPHA 472          

HSP 2 Score: 146.747 bits (369), Expect = 1.330e-40
Identity = 93/247 (37.65%), Postives = 123/247 (49.80%), Query Frame = 0
Query:    2 GMLXLKSVTCPDSVSNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCCPSGYTCSKGFC-----------TQSLTKEANKIVIAQLRSVECPDGMSECPSGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYNCN---SGTCTKGNEVIKASLKTKAISLTNVACPDGQSECPSGNTCCKLSSGGYGCCPLPKAXVEIPAVNC----HLVDTVAVLCLK-PHVV-LMEFIAVQMDIAATVAFVK 228
            G   + ++ CPDS   CPD +TCC +  G WGCCP+  A CC D VHCCP G  C                 + L  +     +A   SV CPD  S CP G+TCC+L SG++GCCP+P ATCCSD +HCCP    C+   S   +K N       K  A ++ +V C D +  CP G TCC+L SG +GCCP  +A      ++C       DT    C + PH V  ME     + +    A  +
Sbjct:  117 GNNSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCITPTGTHPLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTVGDVKC-DMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKR 362          

HSP 3 Score: 135.191 bits (339), Expect = 1.526e-36
Identity = 81/197 (41.12%), Postives = 111/197 (56.35%), Query Frame = 0
Query:   16 SNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCCPSGYTCSKGFCTQSLTKEANKIVIAQLRSVECPDGMSECPSGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYNCN---------SGTCTKGNEVIKASLKTKAISLTN-VACPDGQSECPSGNTCCKLSSGGYGCCPLPKAXVEIPAVNCHLVDTVAVL 202
            ++C  G++C    SG   CCP  +AV C DG HCCP G+ CS         +  N  V A    ++CPD   ECP  +TCC +  G WGCCP+P+A+CC D VHCCP+G  C+         +GT     + + A    +A++L++ V CPD +S CP G+TCC+L SG YGCCP+P A      ++C   DTV  L
Sbjct:   65 AHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADG-RSCFQRSGNNSVGA----IQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCITPTGTHPLAKK-LPAQRTNRAVALSSSVMCPDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDL 255          

HSP 4 Score: 134.035 bits (336), Expect = 5.159e-36
Identity = 77/182 (42.31%), Postives = 103/182 (56.59%), Query Frame = 0
Query:   13 DSVSNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCCPSGYTC-SKGFCTQ------SLTK-EANKIVIAQLRSVECPDGMSECPSGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYNCNSGTCTKGNEVIKAS-----LKTKAISLTNVACPDGQSECPSGNTCCKLSSGGYGCCPL 181
            D+VS+CP  +TCC+L+SGEWGCCP+ +AVCCSD  HCCP GYTC ++G C +       L K  A +  ++  R + C D  + CP G TCC    G W CC LP A CC D  HCCP GY CN    +   EV+ A       ++  + + +V C +G   C    TCC+ +  G+ CCP 
Sbjct:  367 DNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGC-DQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKEVVSAQPATFLARSPHVGVKDVECGEGHF-CHDNQTCCRDNRQGWACCPY 546          

HSP 5 Score: 86.2705 bits (212), Expect = 2.292e-19
Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 0
Query:   13 DSVSNCPDGNTCCKLSSGEWGCCPVKDAVCCSDGVHCCPSGYTCS--KGFCTQSLTKEANKIVIAQ-----LRSVECPDGMSECPSGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYNCNSGTCTKGNEVIKASLKTKAISLTNVA 154
            D  ++CP G TCC    G W CC +  AVCC D  HCCP+GYTC+     C + +        +A+     ++ VEC +G   C    TCC+ +   W CCP  +  CC+D  HCCP G+ C +    +G + ++         L + A
Sbjct:  445 DQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKEVVSAQPATFLARSPHVGVKDVECGEGHF-CHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAA----RGTKCLRREAPRWDAPLRDPA 588          
The following BLAST results are available for this feature:
BLAST of TCONS_00011745-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRN2.917e-4245.26Granulins OS=Homo sapiens GN=GRN PE=1 SV=2[more]
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