TCONS_00011762-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011762-protein
Unique NameTCONS_00011762-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011762-protein ID=TCONS_00011762-protein|Name=TCONS_00011762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MVITNKEVGVNDMVLLDPVTEDNLLHNLQIRFNESKIYTYIGDVVVSVNP
YKSLPIYTREYMQEYRTKNIFEVPPHIFSLADDAYCSMRDYNLDQCIIIS
GESGAGKTEASKIVMRYVAAVSGHGDKVGEIKEQLLQSNPVLEAFGNAKT
TRNDNSSRFGKYMDLEFDFKGFPIGGVITNCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006607XLOC_006607Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011762TCONS_00011762Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001609Myosin_head_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003774motor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016459 myosin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001609Myosin head, motor domainPRINTSPR00193MYOSINHEAVYcoord: 140..167
score: 74.92
coord: 38..57
score: 60.71
coord: 94..119
score: 62.9
IPR001609Myosin head, motor domainSMARTSM00242MYSc_2acoord: 2..182
e-value: 1.9E-13
score: -313.8
IPR001609Myosin head, motor domainPFAMPF00063Myosin_headcoord: 10..180
e-value: 1.5E-78
score: 264.6
IPR001609Myosin head, motor domainPROSITEPS51456MYOSIN_MOTORcoord: 8..182
score: 83.274
NoneNo IPR availableGENE3D3.40.50.300coord: 13..167
e-value: 5.3E-4
score: 19.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..180

Blast
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BLAST of TCONS_00011762-protein vs. Swiss-Prot (Human)
Match: MYO1B (Unconventional myosin-Ib OS=Homo sapiens GN=MYO1B PE=1 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 1.938e-83
Identity = 120/173 (69.36%), Postives = 151/173 (87.28%), Query Frame = 0 
Query:    8 VGVNDMVLLDPVTEDNLLHNLQIRFNESKIYTYIGDVVVSVNPYKSLPIYTREYMQEYRTKNIFEVPPHIFSLADDAYCSMRDYNLDQCIIISGESGAGKTEASKIVMRYVAAVSGHGDKVGEIKEQLLQSNPVLEAFGNAKTTRNDNSSRFGKYMDLEFDFKGFPIGGVITN 180
            +GV DMVLL+P+ E+  ++NL+ RF+ S+IYTYIG VV+SVNPY+SLPIY+ E ++EYR +N +E+ PHIF+L+D+AY S+RD + DQCI+I+GESGAGKTEASK+VM YVAAV G G +V ++KEQLLQSNPVLEAFGNAKT RNDNSSRFGKYMD+EFDFKG P+GGVI+N
Sbjct:   15 IGVGDMVLLEPLNEETFINNLKKRFDHSEIYTYIGSVVISVNPYRSLPIYSPEKVEEYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISN 187
The following BLAST results are available for this feature:
BLAST of TCONS_00011762-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO1B1.938e-8369.36Unconventional myosin-Ib OS=Homo sapiens GN=MYO1B ... [more]
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