TCONS_00011975-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011975-protein
Unique NameTCONS_00011975-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length671

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011975-protein ID=TCONS_00011975-protein|Name=TCONS_00011975-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
MTQSKNDFLILYGSQTGQAQAISEEIFDKAHKEGFSPRRFCLSMIEKKFS
LIKENLVVFVCSTTGEGEPPDTASKFFRRLKKKTLANNHLEHLRFAFLAL
GDSNYTNFCACGKNIDARLLDLGAKHIYDTGYADDAVGLEIAVEPWIENL
FPALRKHLNLSQTDVAEKGMDDTQQNEEKDVKEPAIAEDKQDSSLYKSID
SLSSAALKIPSCPDSYLEIEHFDADTQEIKEAKPRHPSAETDVFEALVKS
AKRLTNDPLVKKTLQLELDTLSYDFDFQPGDSFGIVCHNTNSDVDYLIQR
LEISDADEQMTLKIKKETKKKAPTIPEHINIPSSIRKILTDDVDFRAVPR
KGFIRMMVDYTEDPQEKRRLQELCSVQGGKEYTMFIREQSIGLVEMLMTF
KSCKPPIQRVLEFLPRLLPREYSVANSPLEDKKMVRFVFNIIEFPDFLQN
KRYGLCTNYLDKLTQSFQQQLHQESQKKNVEKMVHDLSIKDKPTVAMYFR
RPTNFRFPEDPSHPLIMIGPGTGVAPFIGFLDHRVGLRKQDASINFGEAH
LFCGCRYKEKDFLYRSEIENHLASGNLTQLYASHSRDERQGPSHTKYVQE
NIKKFKEKLLELIFEQQGAVYICGDAKHMGRDVTNTFVELIGEYKELSKF
ESIKLLDSLRKTKQFLEDVWT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006718XLOC_006718Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011975TCONS_00011975Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001094Flavdoxin-like
IPR001709Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR003097FAD-binding_1
IPR029039Flavoprotein-like_dom
IPR001433OxRdtase_FAD/NAD-bd
IPR008254Flavodoxin/NO_synth
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0010181FMN binding
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001094Flavodoxin-likePRINTSPR00369FLAVODOXINcoord: 9..22
score: 44.64
coord: 58..69
score: 51.3
coord: 92..102
score: 37.93
coord: 116..135
score: 37.5
IPR001709Flavoprotein pyridine nucleotide cytochrome reductasePRINTSPR00371FPNCRcoord: 420..427
score: 45.69
coord: 547..556
score: 44.94
coord: 454..463
score: 28.28
coord: 277..287
score: 31.35
coord: 516..535
score: 52.01
coord: 560..571
score: 34.67
coord: 619..627
score: 43.17
IPR003097FAD-binding, type 1PFAMPF00667FAD_binding_1coord: 238..459
e-value: 1.1E-39
score: 136.2
IPR029039Flavoprotein-like domainGENE3D3.40.50.360coord: 1..171
e-value: 5.7E-45
score: 152.6
IPR029039Flavoprotein-like domainSUPERFAMILY52218Flavoproteinscoord: 7..160
IPR001433Oxidoreductase FAD/NAD(P)-bindingPFAMPF00175NAD_binding_1coord: 517..633
e-value: 3.0E-14
score: 53.5
NoneNo IPR availableGENE3D1.20.990.10coord: 266..401
e-value: 2.3E-33
score: 114.5
NoneNo IPR availableGENE3D2.40.30.10coord: 402..517
e-value: 3.5E-21
score: 74.8
NoneNo IPR availableGENE3D3.40.50.80coord: 518..671
e-value: 1.8E-32
score: 111.9
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 504..670
IPR008254Flavodoxin/nitric oxide synthasePFAMPF00258Flavodoxin_1coord: 10..146
e-value: 6.3E-32
score: 110.6
IPR008254Flavodoxin/nitric oxide synthasePROSITEPS50902FLAVODOXIN_LIKEcoord: 8..151
score: 25.438
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 241..508
score: 9.658
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 230..464

Blast
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BLAST of TCONS_00011975-protein vs. Swiss-Prot (Human)
Match: MTRR (Methionine synthase reductase OS=Homo sapiens GN=MTRR PE=1 SV=3)

HSP 1 Score: 527.324 bits (1357), Expect = 2.707e-179
Identity = 288/708 (40.68%), Postives = 429/708 (60.59%), Query Frame = 0 
Query:    8 FLILYGSQTGQAQAISEEIFDKAHKEGFSPRRFCLSMIEKKFSLIKENLVVFVCSTTGEGEPPDTASKFFRRLKKKTLANNHLEHLRFAFLALGDSNYTNFCACGKNIDARLLDLGAKHIYDTGYADDAVGLEIAVEPWIENLFPALRKHLNLSQ------------------TDVAEKGM------------DDTQQNEEKDVKEPAIAEDKQD-------SSLYKSIDSLSSAALKIPSCPDSYLEIEHFDADTQEIKEAKPRHPSAETDVFEALVKSAKRLTNDPLVKKTLQLELDTLSYDFDFQPGDSFGIVCHNTNSDVDYLIQRLEISDADEQ-MTLKIKKETKKKAPTIPEHINIPSSIRKILTDDVDFRAVPRKGFIRMMVDYTEDPQEKRRLQELCSVQGGKEYTMFIREQSIGLVEMLMTFKSCKPPIQRVLEFLPRLLPREYSVANSPLEDKKMVRFVFNIIEFPDFLQNK--RYGLCTNYLDKLTQSFQQQLHQESQKKNVEKMVHDLSIKDKPTVAMYFRRPTNFRFPEDPSHPLIMIGPGTGVAPFIGFLDHRVGLRKQDASINFGEAHLFCGCRYKEKDFLYRSEIENHLASGNLTQLYASHSRD----ERQGPSHTKYVQENIKKFKEKLLELIFEQQGAVYICGDAKHMGRDVTNTFVELIGEYKELSKFESIKLLDSLRKTKQFLEDVWT 671
            FL+LY +Q GQA+AI+EEI ++A   GFS    C+S  +K     +   +V V STTG G+PPDTA KF + ++ +TL  +   HLR+  L LGDS YT FC  GK ID RL +LGA+H YDTG+ADD VGLE+ VEPWI  L+PALRKH   S+                  TD+ +  +            DD+ + + + +K+ A+  ++ +       SSL +S+  LS A+L IP  P  YL++   ++  QE  E++    SA+  VF+  +  A +LT +  +K TL +ELD  + DF +QPGD+F ++C N++S+V  L+QRL++ D  E  + LKIK +TKKK  T+P+HI    S++ I T  ++ RA+P+K F+R +VDYT D  EKRRLQELCS QG  +Y+ F+R+    L+++L+ F SC+PP+  +LE LP+L PR YS A+S L     + FVFNI+EF      +  R G+CT +L  L  S  Q         N+     D      P +++  R   +F  P+DPS P+IM+GPGTG+APFIGFL HR  L++Q    NFG   LF GCR+K++D+L+R E+ + L  G LT L  S SRD    E + P+  KYVQ+NI+   +++  ++ ++ G +Y+CGDAK+M +DV +  V++I +   + K E++K L +L++ K++L+D+W+
Sbjct:   31 FLLLYATQQGQAKAIAEEICEQAVVHGFSADLHCISESDKYDLKTETAPLVVVVSTTGTGDPPDTARKFVKEIQNQTLPVDFFAHLRYGLLGLGDSEYTYFCNGGKIIDKRLQELGARHFYDTGHADDCVGLELVVEPWIAGLWPALRKHFRSSRGQEEISGALPVASPASSRTDLVKSELLHIESQVELLRFDDSGRKDSEVLKQNAVNSNQSNVVIEDFESSLTRSVPPLSQASLNIPGLPPEYLQVHLQESLGQE--ESQVSVTSADP-VFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLLKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACACLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQ--------PNIHASHEDSGKALAPKISISPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPA--KYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 725
The following BLAST results are available for this feature:
BLAST of TCONS_00011975-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTRR2.707e-17940.68Methionine synthase reductase OS=Homo sapiens GN=M... [more]
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