TCONS_00011991-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011991-protein
Unique NameTCONS_00011991-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1012

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011991-protein ID=TCONS_00011991-protein|Name=TCONS_00011991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1012bp
NQQRHKTSKYIACQSSYQNKRHQAVLLKFVIQRQINMEGTPSPPPPPIDQ
TPEDDFPSPPPPDFPEPPSMEEATMAGEEPPQTPRSAKETLSFDNPLANI
PVVPKGNPDVPEKTEQDDFDFGTTGILAKGLSKDSVSLAERGVCGGSSPA
PGPPPPRGGGGPGAGDEPPQTPRSAKETLSFDNPLANIPVVPKGNPDVPE
KTEQDDFDFGTTGILAKGLSKDSVSLAERGVCGGSSPAPGPPPPRGGGGP
GAGDEPPQTPRSAKETLSFDNPLANIPVVPKGNPDVPEKTEQDDFDFTDA
DAAIDKMLDDLADFQDFLGPDTTKDKKEDFAMLSPTKKPLVAPPISTDSL
DHLRFSMGNFEETPEVDLDALLEDLCVMERDIKESSVATLKRKGYNISES
DRTIDSTGTGSTMTDDDDIHEFKPNSPSYRPSSPVMVTHDVKERLENLQN
ELESKELTPEEQEARIKAEKMKIALEKMKAASFQKLFIKVLNTEKQTWKT
MMVDQTWTVRDVTQKMVSKDDVEIEPNWCILEKLPDLDMERIMEDHEFVL
NTALDWSRETENMLVFANRRDKYLLFRNPQNFLLSDYHSAEDARLAEKSK
DLLLEEFFSKENTQIPQIEGLLSVRKGGSKKWEKHYVVLRASGVYYNPKG
KQKTRELSCLVQFEHNNIYLGVGYKKKYKAPTDHVICLKHPKIQNIKSKH
IIYLCADDSKTMYHWLTCIRMAKYGYNMYEDYLTTQQEVERVLLAGSRST
ITSQVSTTSSNNTSSNASTLDRKAKIGTVRGTVRGTVRGTVRHQVKNADG
TVERVKGKQDALAEVFSTAWSKGIAEIEASMVPESPFSPELKSPASPMSP
EGRSPAKTFDFTNSSINTTTHGTTGEKLTLDPVPPGRKASQKSTTSTVSA
ASSDGMSGGSDTFGEELPPPPPDLPPPPSNMFSPDSSSDDLPLPPPPPPP
GDTPSPPPPPPPPPFNGTLSPPPPPPPPPSNGISPPPPPPPPLSSKPGGP
PPPPPLNAKPTR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006728XLOC_006728Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011991TCONS_00011991Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR000159RA_dom
IPR011993PH_dom-like
IPR029071Ubiquitin-rel_dom
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 438..481
NoneNo IPR availableGENE3D3.10.20.90coord: 455..573
e-value: 1.2E-19
score: 70.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 834..1012
NoneNo IPR availableCDDcd01259PH_APBB1IPcoord: 611..733
e-value: 5.44879E-53
score: 180.895
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 616..726
e-value: 2.8E-7
score: 40.2
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 617..723
e-value: 1.2E-7
score: 32.1
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 615..724
score: 7.49
IPR000159Ras-associating (RA) domainSMARTSM00314RA_5coord: 482..571
e-value: 7.7E-4
score: 28.8
IPR000159Ras-associating (RA) domainPFAMPF00788RAcoord: 486..569
e-value: 7.5E-7
score: 29.6
IPR000159Ras-associating (RA) domainPROSITEPS50200RAcoord: 484..571
score: 14.996
IPR011993PH domain-likeGENE3D2.30.29.30coord: 605..779
e-value: 2.2E-12
score: 46.1
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 616..725
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 477..576

Blast
[Close]
BLAST of TCONS_00011991-protein vs. Swiss-Prot (Human)
Match: RAPH1 (Ras-associated and pleckstrin homology domains-containing protein 1 OS=Homo sapiens GN=RAPH1 PE=1 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 5.444e-81
Identity = 129/277 (46.57%), Postives = 194/277 (70.04%), Query Frame = 0 
Query:  457 LTPEEQEARIKAEKMKIALEKMKAASFQKLFIKVLNTEKQTWKTMMVDQTWTVRDVTQKMVSKDDVEIEPNWCILEKLPDLDMERIMEDHEFVLNTALDWSRETENMLVFANRRDKYLLFRNPQNFLLSDYHSAEDARLAEKSKDLLLEEFFSKENTQIPQIEGLLSVRKGGSKKWEKHYVVLRASGVYYNPKGKQK-TRELSCLVQFEHNNIYLGVGYKKKYKAPTDHVICLKHPKIQNIKSKHIIYLCADDSKTMYHWLTCIRMAKYGYNMYEDY 732
            +T EEQ A++KAEK+++ALEK+K A  +KL I+V  ++  + KTMMVD+  TVR V   ++ K       +W ++E + +L MERI EDHE ++   L+W+R+++N L+F  R +KY LF+NPQN+LL    +AE   +A+++K++LLEE F   +  +P+IEG+L ++  G K W+K Y +LRASG+YY PKGK K +R+L C +Q +H N+Y G  Y+ KYKAPTD+ + LKHP+IQ  KS++I YLC DD +T++ W+  IR+AKYG  +Y +Y
Sbjct:  242 ITEEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHMSDDSS-KTMMVDERQTVRQVLDNLMDKSHCGYSLDWSLVETVSELQMERIFEDHENLVENLLNWTRDSQNKLIFMERIEKYALFKNPQNYLLGKKETAE---MADRNKEVLLEECFCGSSVTVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQK-KSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYMNY 513
The following BLAST results are available for this feature:
BLAST of TCONS_00011991-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAPH15.444e-8146.57Ras-associated and pleckstrin homology domains-con... [more]
back to top