TCONS_00012058-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012058-protein
Unique NameTCONS_00012058-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length437

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012058-protein ID=TCONS_00012058-protein|Name=TCONS_00012058-protein|organism=Clytia hemisphaerica|type=polypeptide|length=437bp
QIDKNKKAMYRTPSLKVVFAYDEDEHYAPPHKISWVTRAKRTSNERWIFI
QCCGQMGNVEKRGEKKLITSRHPCKGNLFSSQLSATEKHHTGRMVLMRTN
HSQIIKHCPPLARWNCCRAELPSWNGRWDSKDLRIPFTYVDTGCKEGRYQ
FTGCIDSDDDDDNDVYDFAMCARPLGSITKEKSKKSSNGPSSGDQTFVIE
NEKLMNPGVIEFTQQSVLKTFTDPLKPSLLDAMQQIFDGEIEIDDFPSIR
VATRDNTTSIGGFYTCDNRRLLMFKVLRIKKIYVQWIGWTSEFDDKLRQN
IKIDPETRVATNDEGIVDFRDDFIDHYCEHSVLNHGDSLFYIPEKFAGYL
IGTNGATIRKKCQKYATHITVRELSKSHRVNTFTDVMKISYSEDAESRKE
YVPGNAKKEHVKMVRKLARRNYLEELALDACETTSPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006775XLOC_006775Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012058TCONS_00012058Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 341..379
e-value: 2.4E-4
score: 20.7
IPR004088K Homology domain, type 1GENE3D3.30.1370.10coord: 339..427
e-value: 1.2E-5
score: 24.7
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 340..418
score: 8.303
NoneNo IPR availableCDDcd00105KH-Icoord: 340..384
e-value: 7.97362E-6
score: 42.1619

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012058-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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