TCONS_00012195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012195-protein
Unique NameTCONS_00012195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012195-protein ID=TCONS_00012195-protein|Name=TCONS_00012195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MSLIARSFSSSKSLLFRNITGTTRVACVHTLSNNKKDESLDAKNVTSLVP
YREQSTVAPAQQQGGLVSNAAEFAVAKVDDLVNWARRSSIWPMTFGLACC
AVEMMQFAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRRVYD
QMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRVVPVDIYVPGCPPTAEA
LLYGVLQLQKKIRRTRNIRMWYRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006862XLOC_006862Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012195TCONS_00012195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006137NADH_UbQ_OxRdtase-like_20kDa
IPR006138NADH_UQ_OxRdtase_20Kd_su
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0048038quinone binding
GO:00515394 iron, 4 sulfur cluster binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0048038 quinone binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitGENE3D3.40.50.700coord: 64..221
e-value: 9.4E-54
score: 181.4
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitPFAMPF01058Oxidored_q6coord: 99..207
e-value: 1.1E-23
score: 83.3
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitTIGRFAMTIGR01957TIGR01957coord: 73..214
e-value: 7.6E-77
score: 254.1
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitPROSITEPS01150COMPLEX1_20Kcoord: 180..196
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitHAMAPMF_01356NDH1_NuoBcoord: 65..213
score: 42.417
NoneNo IPR availableSUPERFAMILY56770HydA/Nqo6-likecoord: 73..221

Blast
[Close]
BLAST of TCONS_00012195-protein vs. Swiss-Prot (Human)
Match: NDUS7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Homo sapiens GN=NDUFS7 PE=1 SV=3)

HSP 1 Score: 299.286 bits (765), Expect = 3.909e-104
Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = 0 
Query:   43 KNVTSLVPYREQSTVAPAQQQGGLVSNAAEFAVAKVDDLVNWARRSSIWPMTFGLACCAVEMMQFAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRVVPVDIYVPGCPPTAEALLYGVLQLQKKIRRTRNIRMWYRK 224
            ++V +  P   Q  +  A+      S+  E+ VAK+DDLVNWARRSS+WPMTFGLACCAVEMM  AAPRYDMDRFGVVFRASPRQ+DVMIVAGTLTNKMAPALR+VYDQMPEPR+V+SMGSCANGGGYYHYSY+VVRGCDR+VPVDIY+PGCPPTAEALLYG+LQLQ+KI+R R +++WYR+
Sbjct:   32 QSVATDGPSSTQPALPKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
The following BLAST results are available for this feature:
BLAST of TCONS_00012195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUS73.909e-10474.73NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
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