Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00012265-protein ID=TCONS_00012265-protein|Name=TCONS_00012265-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2039bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00012265-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.076e-34 Identity = 102/321 (31.78%), Postives = 142/321 (44.24%), Query Frame = 0 Query: 1412 WTTWTACNVLCGPGNRTRTKKEEIEVEMCTGSGLCDTKVFANNSRSCSQFCQEEGDRICNAEMQVGGTMTLFTIHNIQCIHTHFIDETNENFPLIPFVDTLTKSCYMYESEMEFQVNCDAKPSIESQMRLCECKDKET-----------SAMMEWSPWSPCSATCN-GTRKRDRQC--MIGAKGG--CSWLTKEVEPCNGL-CPVHGGLSQWSSWSACSTTCGGGQRQQNRTCDHPPPTNGGNPCVERTIKTEDCNINRCPVHGGWTNWSGEEPCNKPCGTGSIIRRRYCTLPRPLYGGDVCIGSDTLETPCNTHDCQPID 1715 W+ W AC+V CG G + R++ LC+ + AN + C Q E N V G+ + +++ +C T N+ T T++C PS++ R CE E A W PW CS +C GT+ R R C A GG C +++ CN CP+HG + W+SWSACS +CGGG RQ+ R C P P GG C ++++ CN + CP HG W+ WSG C++ C G + R R C P P GG C G D+ CNT C P+D Sbjct: 4535 WSAWRACSVTCGKGIQKRSR-------------LCNQPLPANGGKPC-QGSDLEMRNCQNKPCPVDGSWSEWSLWE-EC--TRSCGRGNQ---------TRTRTCN--------------NPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMC-PVD 4814 HSP 2 Score: 139.428 bits (350), Expect = 1.692e-32 Identity = 97/318 (30.50%), Postives = 131/318 (41.19%), Query Frame = 0 Query: 1411 DWTTWTACNVLCGPGNRTRTKKEEIEVEMCTGSGLCDTKVFANNSRSCSQFCQEEGDRICNAEMQVGGTMTLFTIHNIQCIHTHFIDETNENFPLIPFVDTLTKSCYMYESEMEFQVN----------CDAKPSIESQMRLCECKDKETSAM-MEWSPWSPCSATCNG-TRKRDRQCM--IGAKGG--CSWLTKEVEPCNG-LCPVHGGLSQWSSWSACSTTCGGGQRQQNRTCDHPPPTNGGNPCVERTIKTEDCNINRCPVHGGWTNWSGEEPCNKPCGTGSIIRRRYCTLPRPLYGGDVCIGSDTLETPCNTHDC 1711 +W+ W C CG GN+TRT R+C+ + G R C G + NI+ H + + T ++SC N CD E+QM++C ++ W+ WS CS +C G R+R R C + GG C + + CN CP HG S WS W CS TC GGQ ++ RTCD+PPP+NGG C + + CN + CPV G W +W C+ CG G R+R C P P+ GG C G T T CN C Sbjct: 4591 EWSLWEECTRSCGRGNQTRT-------------------------RTCNNPSVQHGGRPCE------GNAVEIIMCNIRPCPVHGAWSAWQPW------GTCSESCGKGTQTRARLCNNPPPAFGGSYCDGA---ETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQAC 4868 HSP 3 Score: 130.954 bits (328), Expect = 4.940e-30 Identity = 72/205 (35.12%), Postives = 103/205 (50.24%), Query Frame = 0 Query: 1515 SCYMYESEME--FQVNCDAKPSIESQMRLCECKDKETSAMMEWSPWSPCSATCN-GTRKRDRQC--MIGAKGG--CSWLTKEVEPC-NGLCPVHGGLSQWSSWSACSTTCGGGQRQQNRTCDHPPPTNGGNPCVERTIKTEDCNINRCPVHGGWTNWSGEEPCNKPCGTGSIIRRRYCTLPRPLYGGDVCIGSDTLETPCNTHDC 1711 S Y+ +++ E + C A+ + S + + +WS W CS TC G +KR R C + A GG C E+ C N CPV G S+WS W C+ +CG G + + RTC++P +GG PC ++ CNI CPVHG W+ W C++ CG G+ R R C P P +GG C G++T CN +C Sbjct: 4493 SLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNC 4697 HSP 4 Score: 94.3597 bits (233), Expect = 6.599e-19 Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0 Query: 1555 WSPWSPCSATCNGTR-KRDRQC--MIGAKGG--CSWLTKEVEPCN-GLCPVHGGLSQWSSWSACSTTCGGGQRQQNRTCDHPPPTNGGNPCVERTIKTEDCNINRCP 1655 WS W CS TCNG + +R R C + GG C +++ CN +CPV G W SWS CS +CGGG++ + R CDHP P GG PC T + CN+ CP Sbjct: 4763 WSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACP 4869 The following BLAST results are available for this feature:
BLAST of TCONS_00012265-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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