TCONS_00012383-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012383-protein
Unique NameTCONS_00012383-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012383-protein ID=TCONS_00012383-protein|Name=TCONS_00012383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MAENDIGDWFRNIPIISRWWFTLSIMFPLLGRIGLLHPYYMVLSFQLIFY
KFQIWRLFTCIVFFPLSPQTGFHYLINLYFLYSYSTRLETGVFDGRPADY
LFLLIFNSIALILLGFAMNLMFLMDAIILSVLYIWCQLNKDQIVSFWFGT
QFKAMYLPWVLAAFNMILGQGGLMEIIGIFVGHMYFFLMFKYPQDFGGRR
FLTTPAFLYNYLPNRRGGVAGFGQAPASRRDNSNRGANAFGGSGNRLGDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006963XLOC_006963Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012383TCONS_00012383Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04511DER1coord: 13..205
e-value: 1.1E-65
score: 221.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..250
IPR022764Peptidase S54, rhomboid domainSUPERFAMILY144091Rhomboid-likecoord: 11..194

Blast
[Close]
BLAST of TCONS_00012383-protein vs. Swiss-Prot (Human)
Match: DERL1 (Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 6.336e-104
Identity = 146/250 (58.40%), Postives = 185/250 (74.00%), Query Frame = 0 
Query:    4 NDIGDWFRNIPIISRWWFTLSIMFPLLGRIGLLHPYYMVLSFQLIFYKFQIWRLFTCIVFFPLSPQTGFHYLINLYFLYSYSTRLETGVFDGRPADYLFLLIFNSIALILLGFAMNLMFLMDAIILSVLYIWCQLNKDQIVSFWFGTQFKAMYLPWVLAAFNMILGQGGLMEIIGIFVGHMYFFLMFKYPQDFGGRRFLTTPAFLYNYLPNRRGGVAGFGQAPASRR---DNSNRGANAFGGSGNRLGDD 250
            +DIGDWFR+IP I+R+WF  ++  PL+G++GL+ P Y+ L  +   Y+FQIWR  T   +FP+ P TGF YL+NLYFLY YSTRLETG FDGRPADYLF+L+FN I +++ G AM++  LM  +I+SVLY+W QLN+D IVSFWFGT+FKA YLPWV+  FN I+G   + E+IG  VGH+YFFLMF+YP D GGR FL+TP FLY +LP+RRGGV+GFG  PAS R   D +  G     G G RLGD 
Sbjct:    2 SDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGDQ 251
The following BLAST results are available for this feature:
BLAST of TCONS_00012383-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DERL16.336e-10458.40Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1[more]
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