TCONS_00012445-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012445-protein
Unique NameTCONS_00012445-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012445-protein ID=TCONS_00012445-protein|Name=TCONS_00012445-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
FLKAQSYITCKGIVPLDDTTVDKVICHHSACLVLFHHKYGYGMPEKEFEQ
LGELAAANSEVLIAEIGTTDWGDTENHYTRKKYDVALADYPSVLLFTRKR
PPIKYRGEITKSNIVSWLMEKTGVLLENETSLAQIQHQARRFMKIYLDQS
EDDKQTEVEKMITKTEDMIGNIRTDSDKALCNVYIQVMKKVLAKGRDYIS
NEPLRLRNLIRRGQVSEEKKIVFQQKIDVLKSFKKYMEEENH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006989XLOC_006989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012445TCONS_00012445Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011679ERp29_C
IPR012883ERp29_N
IPR012336Thioredoxin-like_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0005788endoplasmic reticulum lumen
Vocabulary: Biological Process
TermDefinition
GO:0009306protein secretion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009306 protein secretion
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005788 endoplasmic reticulum lumen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 9..120
e-value: 1.8E-7
score: 30.8
IPR011679Endoplasmic reticulum resident protein 29, C-terminalPFAMPF07749ERp29coord: 154..233
e-value: 6.4E-14
score: 52.5
IPR011679Endoplasmic reticulum resident protein 29, C-terminalGENE3D1.20.1150.12coord: 121..242
e-value: 2.1E-16
score: 60.0
IPR011679Endoplasmic reticulum resident protein 29, C-terminalSUPERFAMILY47933ERP29 C domain-likecoord: 152..235
IPR012883ERp29, N-terminalPFAMPF07912ERp29_Ncoord: 8..126
e-value: 2.3E-21
score: 76.2
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 11..124

Blast
[Close]
BLAST of TCONS_00012445-protein vs. Swiss-Prot (Human)
Match: ERP29 (Endoplasmic reticulum resident protein 29 OS=Homo sapiens GN=ERP29 PE=1 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 4.132e-26
Identity = 66/232 (28.45%), Postives = 120/232 (51.72%), Query Frame = 0 
Query:    6 SYITCKGIVPLDDTTVDKVICHHSACLVLFHHKYGYGMPEKEFEQLGELAAANSEVLIAEIGTTDWGDTENHYTRKKYDVALADYPSVLLFTRK--RPPIKYRGEITKSNIVSWLMEKTGVLLENETSLAQIQHQARRFMKIYLDQSEDDKQTEVEKMITKTEDMIGNIRTDSDKALCNVYIQVMKKVLAKGRDYISNEPLRLRNLIRRGQVSEEKKIVFQQKIDVLKSFKK 235
            S +  KG +PLD  T  KVI      LV F  +Y YG  + EF++L E +A++ ++L+AE+G +D+GD  N    +KY +    YP   LF       P+ Y G +    I  WL +  GV L     L      A  F++    ++        + ++ + +D + +++ ++ K     Y+++M K+L +G D+ ++E  R+  LI + ++S+ KK   Q+ +++L +F+K
Sbjct:   31 SGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWL-KGQGVYLGMPGCLPVYDALAGEFIRASGVEAR-------QALLKQGQDNLSSVK-ETQKKWAEQYLKIMGKILDQGEDFPASEMTRIARLIEKNKMSDGKKEELQKSLNILTAFQK 253
The following BLAST results are available for this feature:
BLAST of TCONS_00012445-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERP294.132e-2628.45Endoplasmic reticulum resident protein 29 OS=Homo ... [more]
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