TCONS_00012631-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012631-protein
Unique NameTCONS_00012631-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length355

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012631-protein ID=TCONS_00012631-protein|Name=TCONS_00012631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=355bp
MSQRIGKVQKYEMMSTNDIQSVIEDLFPSFRQQEQQKEIPSTDTNNKKKK
MYEQSLDAEYFHPSYNNMYHPESQHFYDDYNNNNNYIKNHPSVPSPPYLP
TPPSTPDKIPMSYGNFNHPVASAPPPYMTSHSYHHQTSTQNNQFSPTCDM
QVVPDFFGGKDDENINHEVHHPYANHHLDENYNPTATPPHYLHLQPTHQQ
HNNEMPDIGQKRVYNSINHNAQSPIDFYMTNSNHENNYIRQQMAYEAMFH
GHPAMKRQRYDSHETIEPELSRATHNILERQRRNDLKLRFSILRDNIPEL
ASHEKAPKIQILRKGLEYLTILKSEEQKLIADKELEKQRKLILMERLKTL
RQSNH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007085XLOC_007085Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012631TCONS_00012631Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 276..328
e-value: 1.3E-9
score: 48.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 271..354
e-value: 8.5E-11
score: 41.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 272..320
e-value: 8.1E-12
score: 44.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 270..322
score: 13.783
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 268..327
e-value: 1.70253E-12
score: 60.6907
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 271..347

Blast
[Close]
BLAST of TCONS_00012631-protein vs. Swiss-Prot (Human)
Match: MYC (Myc proto-oncogene protein OS=Homo sapiens GN=MYC PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.123e-20
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0 
Query:  232 SNHENNYIRQQMAYEAMFHGHPAMKRQRYDSHETI-----------------EPELSRATHNILERQRRNDLKLRFSILRDNIPELASHEKAPKIQILRKGLEYLTILKSEEQKLIADKELEKQRKLILMERLKTLRQS 353
            S H++NY     A  +    +PA KR + DS   +                 E  + R THN+LERQRRN+LK  F  LRD IPEL ++EKAPK+ IL+K   Y+  +++EEQKLI++++L ++R+  L  +L+ LR S
Sbjct:  303 STHQHNY----AAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLRNS 437
The following BLAST results are available for this feature:
BLAST of TCONS_00012631-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYC2.123e-2039.57Myc proto-oncogene protein OS=Homo sapiens GN=MYC ... [more]
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