TCONS_00012865-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012865-protein
Unique NameTCONS_00012865-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length261

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012865-protein ID=TCONS_00012865-protein|Name=TCONS_00012865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MYDRAPRLISLGTSSTTDEVGPGKYDPDLTNRRKQDGYAPFLSMSMRNSF
LAVKSDIAAVPGPGAYNPRIYETISGGSALANQSMRFHDKPRDTPGPGTY
NLSKPSDWLKEQKYRCEDGVQSFKKDNKTSQVNIHYQRKSAPPSIPSPGQ
AYGYEENKDGRLQKQKIPAKDCSLGPAYYKINYDDTKAVQKYKGIHFGNM
TSKRTSIKKVEDLPGPGAYDPYKPKPKAPIDLIMEEQQKNTVAAQLPRYH
EIVTKQETKKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007217XLOC_007217Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012865TCONS_00012865Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 213..229
e-value: 0.23
score: 12.3
coord: 61..68
e-value: 0.52
score: 11.2
coord: 21..47
e-value: 0.62
score: 11.0
coord: 94..113
e-value: 0.053
score: 14.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Blast
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BLAST of TCONS_00012865-protein vs. Swiss-Prot (Human)
Match: STPG2 (Sperm-tail PG-rich repeat-containing protein 2 OS=Homo sapiens GN=STPG2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.312e-31
Identity = 87/261 (33.33%), Postives = 120/261 (45.98%), Query Frame = 0 
Query:    1 MYDRAPRLISLGTSSTTD-EVGPGKYDPDLTNRRKQDGYAPFLSMSMRNSFLAVKSDIAAVPGPGAYNPRIYETISGGSALANQSMRFHDKPRDTPGPGTYNLSKPSDWLKEQKYRCEDGVQSFKKDNKTSQVNIHYQRKSAPPSIPSPGQAYGYEENKDGRLQKQKIPAKDCSLGPAYYKINYDDTKAVQKYKGIHFGNMTSKRTSIKKVEDLPGPGAYDPYKPKPKAPIDLIMEEQQKNTVAAQLPRYHEIVTKQETKK 260
            MYDRAPRL+ L    +T+  VGPG Y      ++     APFLS++ R S   + S I                                  +  PGPG YN+S+       QK          +    T  V++        PSIPS G++YGY  N DG + K   PA D +LGPAYYK  +D + A  KYKGIHFGN + ++   KK    PGPG YD  + K     ++ ++  Q+    + +PR +EI+  QE KK
Sbjct:    1 MYDRAPRLLKLAEGGSTEAHVGPGSYQVPFLKQQATGSNAPFLSLTARESTFTIASSIE---------------------------------KAVPGPGHYNVSE------AQKIS--------RSPTLTRSVDV--------PSIPSCGKSYGYHINDDGSIIKCFPPACDSTLGPAYYKPQFDVSNATLKYKGIHFGNSSGRQELPKK--SGPGPGQYDIVQKKTSYYENVNIKRDQQQNYCSFIPRLYEIIVLQEKKK 204
The following BLAST results are available for this feature:
BLAST of TCONS_00012865-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STPG22.312e-3133.33Sperm-tail PG-rich repeat-containing protein 2 OS=... [more]
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