TCONS_00012995-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012995-protein
Unique NameTCONS_00012995-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012995-protein ID=TCONS_00012995-protein|Name=TCONS_00012995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=105bp
RHYFQNTQGIIYVIDSNDRERIQEAQEVLKNMLSQDELTDAALLVLANKQ
DLPNALSASQITEKLGLLDIRNRSWYTQATCASNGDGLYEGLDWLSNEMK
KRKDY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007285XLOC_007285Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012995TCONS_00012995Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..103
e-value: 6.7E-25
score: 98.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..105
e-value: 4.1E-25
score: 87.6
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 1..98
e-value: 2.4E-35
score: 121.5
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 1..99
score: 11.757
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..102

Blast
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BLAST of TCONS_00012995-protein vs. Swiss-Prot (Human)
Match: ARF3 (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.839e-52
Identity = 71/103 (68.93%), Postives = 92/103 (89.32%), Query Frame = 0 
Query:    1 RHYFQNTQGIIYVIDSNDRERIQEAQEVLKNMLSQDELTDAALLVLANKQDLPNALSASQITEKLGLLDIRNRSWYTQATCASNGDGLYEGLDWLSNEMKKRK 103
            RHYFQNTQG+I+V+DSNDRER+ EA+E L  ML++DEL DA LLV ANKQDLPNA++A++IT+KLGL  +R+R+WY QATCA++GDGLYEGLDWL+N++K +K
Sbjct:   79 RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
The following BLAST results are available for this feature:
BLAST of TCONS_00012995-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARF31.839e-5268.93ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
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