TCONS_00013041-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013041-protein
Unique NameTCONS_00013041-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013041-protein ID=TCONS_00013041-protein|Name=TCONS_00013041-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MEMQKQSKAILLLEAFYGGSHKQLIDYLREMLIRKGHACDCITMSDKKWH
WRMRTSSMFFAQELNHKMEEGKNLSYDTVFTSAVVNLAELVGLCPVIRNA
RKVLYFHENQLIYPVRKQQDRDFQYGYNQVVSCLIADVVLFNSEFNKQSF
LNNIKPYMKTMPDYRPSNQVRDKIASKCHVLYYIFRSPVLGSESPTPAKL
RILDEETTSNRPTSASDNSNIIESQINSQDRTVNEESEDSEALDPLHIVW
PHRWEHDKNPEDFFKVMFQLHDEGVPFKLSVIGQTYQDVPEIFETAKRKL
DSVIINWGYQSRSDYIIIIKNADVAVSTANHEFFGVSMLECVSSGCYPLV
PNRLVYPEFFTECYRYNTTTQLHKKLRNLCKSISYTRNHQVKVDLTRFDE
GVLEKEYLKYILPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007294XLOC_007294Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013041TCONS_00013041Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022701GlycosylTrfase_1_N
IPR001296Glyco_trans_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022701Glycosyltransferase family 1, N-terminalPFAMPF12038DUF3524coord: 10..183
e-value: 1.3E-64
score: 217.0
NoneNo IPR availableGENE3D3.40.50.2000coord: 205..390
e-value: 1.4E-15
score: 56.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..238
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 27..199
coord: 230..381
IPR001296Glycosyl transferase, family 1PFAMPF00534Glycos_transf_1coord: 246..362
e-value: 1.9E-9
score: 37.2

Blast
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BLAST of TCONS_00013041-protein vs. Swiss-Prot (Human)
Match: GTDC1 (Glycosyltransferase-like domain-containing protein 1 OS=Homo sapiens GN=GTDC1 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 3.998e-116
Identity = 192/458 (41.92%), Postives = 264/458 (57.64%), Query Frame = 0 
Query:    9 AILLLEAFYGGSHKQLIDYLREMLIRKGHACDCI--TMSDKKWHWRMRTSSMFFAQELNHKMEEGKNLSYDTVFTSAVVNLAELVGLCPVIRNARKVLYFHENQLIYPVRKQQDRDFQYGYNQVVSCLIADVVLFNSEFNKQSFLNNIKPYMKTMPDYRPSNQVRDKIASKCHVLYYIFRSP----------------VLGSESPTPAKLRI---------------------------LDEETTSNRPTSASDNSNIIESQINSQDRTVNEESEDSEALDP-------------LHIVWPHRWEHDKNPEDFFKVMFQLHDEGVPFKLSVIGQTYQDVPEIFETAKRKLDSVIINWGY-QSRSDYIIIIKNADVAVSTANHEFFGVSMLECVSSGCYPLVPNRLVYPEFFTECYRYNTTTQLHKKLRNLCKSISYTRNHQVKVDLTRFDEGVLEKEY 407
            +IL++EAFYGGSHKQL+D L+E L       DC+  T+  KKWHWR RTS+++F+Q +   + E     Y T+F S+V+NL EL  L P +   +K+LYFHENQLIYPV+K Q+RDFQYGYNQ++SCL+ADVV+FNS FN +SFL ++  +MK +PD+RP + +   I  KC V+Y+  R P                +LG +    A L +                           LD         S    S++ +S  +    + + E++ +  +DP             LHIVWPHRWEHDK+PE FFKV+  L D G+ F +SV+G+T+ DVP+IF  AK+ L S +++WGY  S+ DY  ++  ADV +STA HEFFGV+MLE V  GCYPL P  LVYPE F   Y Y+T  QL K+L+N CK     R H  K ++  F    L  ++
Sbjct:    2 SILIIEAFYGGSHKQLVDLLQEEL------GDCVVYTLPAKKWHWRARTSALYFSQTI--PISE----HYRTLFASSVLNLTELAALRPDLGKLKKILYFHENQLIYPVKKCQERDFQYGYNQILSCLVADVVVFNSVFNMESFLTSMGKFMKLIPDHRPKD-LESIIRPKCQVIYFPIRFPDVSRFMPKHKTTHLKKMLGLKGNGGAVLSMALPFQPEQRDSEDLLKNFNSECDTHCGLDTARQEYLGNSLRQESDLKKSTSSDNSSSHHGENKQNLTVDPCDILGGVDNQQRLLHIVWPHRWEHDKDPESFFKVLMHLKDLGLNFHVSVLGETFTDVPDIFSEAKKALGSSVLHWGYLPSKDDYFQVLCMADVVISTAKHEFFGVAMLEAVYCGCYPLCPKDLVYPEIFPAEYLYSTPEQLSKRLQNFCKRPDIIRKHLYKGEIAPFSWAALHGKF 446
The following BLAST results are available for this feature:
BLAST of TCONS_00013041-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTDC13.998e-11641.92Glycosyltransferase-like domain-containing protein... [more]
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