TCONS_00013075-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013075-protein
Unique NameTCONS_00013075-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013075-protein ID=TCONS_00013075-protein|Name=TCONS_00013075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MFNWRFKYNFKYHQAKRQIVRKETNVAFEKTALYYRPELVIECLENDLFS
HDVLGERRINLLKVPPYFGKPWGWSMGKYKELAKNENRTPSLFNCSTIRG
WWPLETDDPEREDGDGGRVELELELLTKEEADENPVGEQRNEPHALSKPK
RPQESMRLLIGPLRTLRIFVNSHRGLICKVVFLLLLVILMLLFLYAMPGA
AVQKMFGAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007321XLOC_007321Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013075TCONS_00013075Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR032362Ferlin_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3D2.60.40.150coord: 1..130
e-value: 2.3E-6
score: 27.1
IPR032362Ferlin, C-terminal domainPFAMPF16165Ferlin_Ccoord: 117..205
e-value: 1.7E-17
score: 63.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..152

Blast
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BLAST of TCONS_00013075-protein vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 4.265e-25
Identity = 81/213 (38.03%), Postives = 123/213 (57.75%), Query Frame = 0 
Query:    2 FNWRFKYNFKYHQAKRQIV--RKETNVAFEKTALYYRPELVIECLENDLFS-HDVLGERRINLLKVPPYFGKPWGWSMGKYKELAKNENRTP--SLFNCSTIRGWWPLETDDPEREDGDGGRVELELELLTKEEADENPVGEQRNEPHALSKPKRPQESMRLLIGPLRTLRIFV-NSHRGLICKVVFLLLLVILMLLFLYAMPGAAVQKMFGA 208
            FNWR+ + F Y  A+ +IV  +KE+  ++++T       L ++  + D FS  D LG   ++L + P         +M    E+A  E   P  S+F    ++GWWPL   +   E    G+VE EL LLT EEA++NPVG  RNEP  L KP RP  S    + PL++ R F+ +++R L+ K++ LLLL++L+ LFLY++PG  V+K+ GA
Sbjct: 1789 FNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTM----EMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLLALFLYSVPGYLVKKILGA 1997
The following BLAST results are available for this feature:
BLAST of TCONS_00013075-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTOF4.265e-2538.03Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3[more]
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