TCONS_00013108-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013108-protein
Unique NameTCONS_00013108-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013108-protein ID=TCONS_00013108-protein|Name=TCONS_00013108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1224bp
MGKGKKKRNDDDWENDLDEIAKEAGIDLSNQSEEVPDIPQPSKKEKKKKK
GKVEEKNEELEEDKEENEVTGAPSKKANKSKPSFSSLMLEDDEDDNDEPS
DQESPEEIVTQTQSKSKKKKDKKKKNKNDENDDIADILNDLELTDKKEDK
SSKKSKKKKKKDQDLEDVHNIEDNENQEQETNKTEPEQTEKAEDVENENK
DNANENKDNDNKEDTEDGSGMKTAAQKRAEKKEREKKKKQEDKKKAKKKK
KEAAAGAAGAAAEEGNEESAKVEDKPEDTAQEDQPKVEDNEGTVKAEGGE
EVEKEGESGDEGEGKDKKKKKKKKKKGGEEEKEDKKKTKKPNKAAIARMQ
EALEEVKREEERLRLEAEAKAKAEEEAEEARLEKLRLEKEKKEKKKQKEK
ERIARLKKEGKFLTPAQKEQKRKAEAMLAAMREQGIHVPSKDDTTAAEKP
KRPQYGRKKKPGKNNQQQKQKEEVTEETKTEEPPKSPEPTKEEPQEKKKE
EEKKEDVTDSWDANDADDGIADSWDAEEDKEDKEKEKAQAETKEKGKKLE
TQVSTKSKEEAEGESSSEEEDESDEEESSDEESDSEDESESESESESEEE
DTRLTPERIKERARDRIERRKLANENNRTTDVLRAPVVCVLGHVDTGKTK
ILDKIRRTNVQDGEAGGITQQIGATNIPVEKIKEQTKMVKEFQKFDLKLP
GLLIIDTPGHESFSNLRSRGSNLCDMAILVVDIMHGLEPQTIESINLLKK
KQTPFVVALNKIDRLYEWKKAPNMQVEDTVKNLKKIAKQEFEERTNLVIN
QFAEQGLNAALHFKNIDEKSYISLVPTSAHSGDGMGDLMAIICRLTQTRL
AKKLAFSEELESTVMEVKAIPGLGMTIDVILVNGQLKEGDTIVTGGIDGA
IITQIRSVLTPQPMRELRVKAQYIHHKCLRAAQGVKLIGKDLDKVLAGSP
VFVAQNPDEVEVLREEVEEFVSSSLKAIKVAERGVYVQASTLGSLEALLE
FLKTSKIPYCGVNIGPVHKRDIMKCSVMLEHEPMYAVVLAFDVKVERDAQ
EYADKEGIKIFTAEIIYHLFDKFTAYCEEYKDKQREKHKHLAVYPCKLKI
MPEHIFNTRDPIVLGVNVEAGTLRIGTPIIVPAKGNVFIGFVTGIEANHK
QLEKAQTGQEVCVKIDAVPGEAPKLFGRHFTDEDIMCSRINRESIDIMKQ
YFRDDMVKSDWQLIIELKKLLSIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007329XLOC_007329Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013108TCONS_00013108Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR023115TIF_IF2_dom3
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR009000Transl_B-barrel
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 342..409
NoneNo IPR availableCOILSCoilCoilcoord: 221..256
NoneNo IPR availableCOILSCoilCoilcoord: 521..550
NoneNo IPR availableCOILSCoilCoilcoord: 43..70
NoneNo IPR availableCOILSCoilCoilcoord: 192..215
NoneNo IPR availableGENE3D3.40.50.300coord: 626..855
e-value: 4.1E-35
score: 120.3
NoneNo IPR availableGENE3D2.40.30.10coord: 857..961
e-value: 1.6E-23
score: 83.0
NoneNo IPR availableGENE3D2.40.30.10coord: 1095..1190
e-value: 5.9E-28
score: 96.4
NoneNo IPR availablePFAMPF00009GTP_EFTUcoord: 637..846
e-value: 1.9E-34
score: 118.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..612
NoneNo IPR availableCDDcd01342Translation_Factor_II_likecoord: 1113..1161
e-value: 0.0053084
score: 35.3728
NoneNo IPR availableCDDcd03703aeIF5B_IIcoord: 860..958
e-value: 1.33394E-43
score: 154.617
NoneNo IPR availableCDDcd01887IF2_eIF5Bcoord: 636..848
e-value: 1.50305E-75
score: 247.0
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 703..713
score: 53.26
coord: 755..764
score: 48.58
coord: 637..650
score: 49.08
coord: 719..730
score: 41.52
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 633..851
score: 45.498
IPR023115Translation initiation factor IF- 2, domain 3GENE3D3.40.50.10050coord: 984..1062
e-value: 2.5E-22
score: 78.4
IPR023115Translation initiation factor IF- 2, domain 3PFAMPF11987IF-2coord: 981..1073
e-value: 6.2E-19
score: 68.0
IPR023115Translation initiation factor IF- 2, domain 3SUPERFAMILY52156Initiation factor IF2/eIF5b, domain 3coord: 968..1087
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 637..791
e-value: 5.5E-17
score: 60.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 627..926
IPR009000Translation protein, beta-barrel domainSUPERFAMILY50447Translation proteinscoord: 1093..1221

Blast
[Close]
BLAST of TCONS_00013108-protein vs. Swiss-Prot (Human)
Match: IF2P (Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4)

HSP 1 Score: 899.042 bits (2322), Expect = 0.000e+0
Identity = 403/622 (64.79%), Postives = 518/622 (83.28%), Query Frame = 0 
Query:  603 RLTPERIKERARDRIERRKLANENNRTTDVLRAPVVCVLGHVDTGKTKILDKIRRTNVQDGEAGGITQQIGATNIPVEKIKEQTKMVKEFQKFDLKLPGLLIIDTPGHESFSNLRSRGSNLCDMAILVVDIMHGLEPQTIESINLLKKKQTPFVVALNKIDRLYEWKKAPNMQVEDTVKNLKKIAKQEFEERTNLVINQFAEQGLNAALHFKNIDEKSYISLVPTSAHSGDGMGDLMAIICRLTQTRLAKKLAFSEELESTVMEVKAIPGLGMTIDVILVNGQLKEGDTIVTGGIDGAIITQIRSVLTPQPMRELRVKAQYIHHKCLRAAQGVKLIGKDLDKVLAGSPVFVAQNPDEVEVLREEVEEFVSSSLKAIKVAERGVYVQASTLGSLEALLEFLKTSKIPYCGVNIGPVHKRDIMKCSVMLEHEPMYAVVLAFDVKVERDAQEYADKEGIKIFTAEIIYHLFDKFTAYCEEYKDKQREKHKHLAVYPCKLKIMPEHIFNTRDPIVLGVNVEAGTLRIGTPIIVPAKGNVFIGFVTGIEANHKQLEKAQTGQEVCVKIDAVPGEAPKLFGRHFTDEDIMCSRINRESIDIMKQYFRDDMVKSDWQLIIELKKLLSIM 1224
            R   ER  ++A+ RIE+R+L +  N  T+ LRAP++CVLGHVDTGKTKILDK+R T+VQDGEAGGITQQIGATN+P+E I EQTKM+K F + ++++PG+LIIDTPGHESFSNLR+RGS+LCD+AILVVDIMHGLEPQTIESINLLK K+ PF+VALNKIDRLY+WKK+P+  V  T+K  KK  K EFEER   +I +FA+QGLNAAL ++N D ++++SLVPTSAH+GDGMG L+ ++  LTQT L+K+LA  EEL + VMEVKA+PG+G TIDVIL+NG+LKEGDTI+  G++G I+TQIR +L P PM+ELRVK QY  HK + AAQGVK++GKDL+K LAG P+ VA   DE+ VL++E+   +  +L AIK+ E+GVYVQASTLGSLEALLEFLKTS++PY G+NIGPVHK+D+MK SVMLEH+P YAV+LAFDV++ERDAQE AD  G++IF+AEIIYHLFD FT Y ++YK +++E+ KH+AV+PCK+KI+P++IFN+RDPIV+GV VEAG ++ GTP+ VP+K  V IG VT IE NHKQ++ A+ GQEVCVKI+ +PGE+PK+FGRHF   DI+ S+I+R+SID +K +FRD+M KSDWQLI+ELKK+  I+
Sbjct:  599 RTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTSEVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILPQYIFNSRDPIVMGVTVEAGQVKQGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQSIDALKDWFRDEMQKSDWQLIVELKKVFEII 1220
The following BLAST results are available for this feature:
BLAST of TCONS_00013108-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF2P0.000e+064.79Eukaryotic translation initiation factor 5B OS=Hom... [more]
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