TCONS_00013141-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013141-protein
Unique Name	TCONS_00013141-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	468

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013141-protein ID=TCONS_00013141-protein|Name=TCONS_00013141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
MVEEEKDSLLSNEDGEPSLKQKTVELKVYPQRWLMLFIFSMTTLLNGSMF
MGLSSVVEVVAPYYGVSAVHIEWLSNMFMVVFIFVAMPSAYIMSLFGVRT
VLTLAAGLAAAATAIQFAGAHQDKFQFVLIGQFFAAIAYGNMIQIPGKLS
ATWFPPRERGMSTSIGVFMNILGVAVGFVQPSYQIPVSYDPPVVYVGLKH
FYTARMLMAFIIFFLTVVFYREKPPTPVSVIEGKKHLEFFDSLKVLYKDF
HFHLMAQAYGIYFGLFVAVSVVFSPLVSWQYGSKGDIQHLIGWMGFTCDI
AAIISCLAIGFFLDRYSHHKAVAIFLNAGSMLLWLLFALILTQTKNFNLL
FFVYVVYGTVGIPYFASGVEQAAEMTSPVPEGTSSTVILLLGNIYGFVMI
FTFGAMIEDGYPLTTLYLILGLYVLSTAFVTFSKMELKRSEAESTTSTIS
IGDDEEDSDEKPKLNDSR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007343	XLOC_007343	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013141	TCONS_00013141	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 235..462 e-value: 5.5E-12 score: 44.8
None	No IPR available	GENE3D	1.20.1250.20		coord: 20..234 e-value: 1.5E-19 score: 69.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 441..468
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 41..398 e-value: 6.4E-23 score: 81.1
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 35..438 score: 14.504
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 36..432 e-value: 4.45353E-13 score: 67.7241
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 22..443

Blast

[Close]

BLAST of TCONS_00013141-protein vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.794e-45
Identity = 111/431 (25.75%), Postives = 213/431 (49.42%), Query Frame = 0

Query:   26 LKVYPQRWLMLFIFSMTTLLNGSMFMGLSSVVEVVAPYYGVSAVHIEWLSNMFMVVFIFVAMPSAYIMSLFGVRTVLTLAAGLAAAATAIQFAGAHQDKFQFVLIGQFFAAIAYGNMIQIPGKLSATWFPPRERGMSTSIGVFMNILGVAVGFVQPSYQIPVSYDPPVVYVGLKHFYTARMLMAFIIFFLTVVFYREKPPTPVSVIEGKKH------LEFFDSLKVLYKDFHFHLMAQAYGIYFGLFVAVSVVFSPLVSWQYGSKGDIQHLIGWMGFTCDIAAIISCLAIGFFLDRYSHHKAVAIFLNAGSMLLWLLFALILTQTKNFNLLFFVYVVYGTVG---IPYFASGVEQAAEMTSPVPEGTSSTVILLLGNIYGFVMIFTFGAMIED-GYPLTTLYLILGLYVLSTAFVTFSKMELKRSEAESTT 446
            +KV  +RW ++ +FS  ++ N   ++   S+  +   +YGVSA  I+WLS  +M+ +I + +P A+++  FG+RT+    + L      ++        F   ++GQ   ++A   ++ +P ++++ WF   E   + S+ VF N LG+A+GF+ P   +P   D   +   +   +     +A ++  L ++ ++EKP  P S  +   +        +  S+  L+K+ +F L+   YG+  G F A+S + + +V W Y  +   +   G +G T  IA ++  +  G +LDR   +K   + +     ++ L+  ++ T T N   L+ V++  GT+G     Y   G E A E+T P  EG SS ++ +   ++G +   + G +I++ G     ++L + L  L  A   F K +L+R +A   T
Sbjct:   78 IKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGE---EVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVV----YIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFL-TLGAALTAFIKADLRRQKANKET 500

The following BLAST results are available for this feature:

BLAST of TCONS_00013141-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013141-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC2	2.794e-45	25.75	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00013141-protein (polypeptide) - C. hemisphaerica