TCONS_00013428-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013428-protein
Unique NameTCONS_00013428-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1395

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013428-protein ID=TCONS_00013428-protein|Name=TCONS_00013428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1395bp
HNKPTSLNVADKTDTPSLKHQSQSKTPSYRSLMSPKTNSDSENSEILFSP
RTVSPGKVPSSQVQPSGKHQTLDLSYTTEETVSPRRSPTLFSDRDGENPL
DPVLTSTRRSPRHEPVKNLAPEDTPVTHNVNTRRGDDRMSPNALERRLRA
ELNLFDTVGDSLQQVTEMDRVRDIVQAQQETVSLAQVLKNRQVLHQKELD
RMSIEAREKAAQSARDIEIARRNALEAETKAQKVIAEVKSQAAENVAVST
QAFSKQQNEATALSLDAIKESEKVRRDAFEEYKKSVDDRLANIDGIMNSA
VSAASTAAVEVALRQHREKLESLRKESLHKVSKTFTSFSEESSTVSDRST
TSPTKTSYQTGSSVSTTKDLSIEQQKDKSEISEEIRDETPSRRNISSAKS
PSYTEPVSESYVSASKLKSSPEISERLPTSNRTSPASKSDISEQLPTTKR
TSSVISEKLPSSAGDNTDVTEDVPTEVDEDKELTEALFSTGKKSASRNET
IQSNYSDEKFQSSFTEDDLKHDFRQVLPSENHRRKSLDVHRDFIVSGNDE
TSSDEMLPAQKVAEKVSKKRTRSPFVAEDTFTRFTSDMVRQYIQEEEVRA
KHQASLLALREKAIIDKTKAEIAFLETQKKSLMKKKGARADDKMPPINKK
QRALMKRLESEQAEIRRIKQAHKAASEERKFMLQQQQDIQRIQQSTKKIW
NRIGHYDDVTSQTSDKLWNQIGKYTETSEKSSDSSSTIKEEVKSSSATSS
IITTAASDGSDSRKTTPRSIPQSPKSTQPTPSISEEVLSKPSPTSQGSGS
ISEHVPSKQNSRTQSSKSISEAFSKEKSTTKSISEATSLSKHDSIASIAS
KKTSSTPNTVTPPDEATMSAADEVFDVSQGSSLSKDLKQLKYVAGKKYLT
EREMKLQAKKQQFSEIMNRKTKLKTWRQKIIEEEMRLKADIRKVLNQGIM
KMDETSGRDSGEDSVTNDSPTKPTTARSSSTATTSTRSSKRHQTPLSSTI
KPRDGGEGEHSFVDPPTSVSSIAEEDLDVEEKDDTSDQTITEAINATGST
TKATTLRESESAKAPSSGGSYSYSNDFEEPSPSSVSRSRPPKDLKKSEED
SWTEGTSDASDAEQRLKLLENQLRRKRSELQKLRKQKEKEKLRQKEQELR
RELQVVEQQINKENIPAEVNLPKVTPRVLSPRSSLDTVILPEKIKIPSDK
ESRRSLDFSDRESESDRSLSSNKSSKGDASSSRHSTIIATATNTTRKSPD
RESIKDESSKSTSKTLTKSDKSSLKSDKSVSRILTDTTNKKAISERQDSI
DDISDISAGKDRSSVSGESKESSIAEEIISTQXTDPVFLLNRKNHPLLRR
SFLHRHQKHLLKVLMPFTMTIFLKVNFRCLLRRQRRFHRRKRRLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007501XLOC_007501Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013428TCONS_00013428Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 651..678
NoneNo IPR availableCOILSCoilCoilcoord: 306..326
NoneNo IPR availableCOILSCoilCoilcoord: 1109..1162
NoneNo IPR availableCOILSCoilCoilcoord: 615..635
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableGENE3D1.20.58.60coord: 160..730
e-value: 0.014
score: 14.9

Blast
[Close]
BLAST of TCONS_00013428-protein vs. Swiss-Prot (Human)
Match: CE350 (Centrosome-associated protein 350 OS=Homo sapiens GN=CEP350 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.968e-16
Identity = 48/157 (30.57%), Postives = 93/157 (59.24%), Query Frame = 0 
Query:  115 PVKNLAPEDT-PVTHNVNTRRGDDRMSPNALERRLRAELNLFDTVGDSLQQVTEMDRVRDIVQAQQETVSLAQVLKNRQVLHQKELDRMSIEAREKAAQSARDIEIARRNALEAETKAQKVIAEVKSQAAENVAVSTQAFSKQQNEATALSLDAIKE 270
            P+ +L P  +   T N+    G  R SP  L  R+ AEL+  + + +S++Q+++++RVR I  AQQE+VSLAQ++K +Q  H+++L  + ++A ++A +S R +E  R  A +   ++ + + + + +  E +  +T   + QQ+E   L+ DA ++
Sbjct: 1295 PLTDLNPAASRTTTENMAPIPGSKRFSPAGLHHRMAAELSYLNAIEESVRQLSDVERVRGISLAQQESVSLAQIIKAQQQRHERDLALLKLKAEQEALESQRQLEETRNKAAQVHAESLQQVVQSQREVTEVLQEATCKIAAQQSETARLTTDAARQ 1451
The following BLAST results are available for this feature:
BLAST of TCONS_00013428-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE3501.968e-1630.57Centrosome-associated protein 350 OS=Homo sapiens ... [more]
back to top