TCONS_00014034-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014034-protein
Unique Name	TCONS_00014034-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	669

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014034-protein ID=TCONS_00014034-protein|Name=TCONS_00014034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=669bp
MLMLSRQQPXKLKIQKNSKVLIIMAFHHADVKPTATYIGISDTSKYDDNA
KGIKKKSLNRVWRQLSRVQKMTVVMAIATVVLFFYVFFYKTSVSQVTAER
LSKSDQPLAPIKNPRKSKFDREKYLEKIHKELDSKIRPIKRGPPKKDSPS
NIKKHFEELEKIKKEKVEKKSDDGFKEYNIIDGERDDVKKEKIRLQKINN
ADPSTDFAHNPHKVPQTERQLEVIKAMKHAWKGYKDHAWGHDELRPIAKT
YSEWFMLGLTIVDSLDTLWLMNMKEEYKEARDWVENDLIFDKHVTVNLFE
TTIRVLGGLLSIYHLSADPMYLNKASDLGERLMGAFKSSSSIPYSDVNLK
DKAGRPPAWGPDSSLAEVATIQLEFNDLSMSLTNPRYQSAGHNIMLQIFS
QSRTSGLAPIYINADSGSFRASSHITLGARGDSYYEYLLKQWLQGGKEDD
QMKEEYLKAMDGVMKLLVKKSKPKGLTYVGELLNGRTFSPKMDHLVCFLP
GTLALGYKNGLPESHMTLAKELIETCVQMYKQMGTGLSPEIAYFNERNSG
HKDIIVKPLDAHNLLRPETVESLHVMYEITGDKKYQEYGWDILHAFNKHC
KTPGGGYVSINDVRNAANPRRGEGRDKMESFFLGETLKYLYLLFSDVPIV
PLDKFVFNTEAHPLPIHAR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007851	XLOC_007851	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014034	TCONS_00014034	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001382	Glyco_hydro_47

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding
GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	GENE3D	1.50.10.10		coord: 202..669 e-value: 3.6E-176 score: 586.1
IPR001382	Glycoside hydrolase family 47	PRINTS	PR00747	GLYHDRLASE47	coord: 226..246 score: 53.74 coord: 258..272 score: 57.78 coord: 491..507 score: 50.98 coord: 630..650 score: 62.81 coord: 295..313 score: 61.9 coord: 334..353 score: 37.14 coord: 564..588 score: 42.1 coord: 428..445 score: 62.43
IPR001382	Glycoside hydrolase family 47	PFAM	PF01532	Glyco_hydro_47	coord: 226..666 e-value: 2.8E-158 score: 527.5
IPR001382	Glycoside hydrolase family 47	SUPERFAMILY	48225	Seven-hairpin glycosidases	coord: 217..667

Blast

[Close]

BLAST of TCONS_00014034-protein vs. Swiss-Prot (Human)
Match: MA1B1 (Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Homo sapiens GN=MAN1B1 PE=1 SV=2)

HSP 1 Score: 557.755 bits (1436), Expect = 0.000e+0
Identity = 300/644 (46.58%), Postives = 417/644 (64.75%), Query Frame = 0

Query:   48 DNAKGIKKKSLNRVWRQLSRVQKMTVVMAIATVVLFFYVFF------YKTSVSQVTAER--------LSKSDQPLAPIKNPRKSKFDREKYLEKIHKELDSKIRPIKRGPPK---KDSPSNIKKHFEELEKIKKEKVEKKSDDGFKEYNIIDGERDDVKKEKIRLQKINNADPSTDFAHNPHKVPQTE-----RQLEVIKAMKHAWKGYKDHAWGHDELRPIAKTYSEWFMLGLTIVDSLDTLWLMNMKEEYKEARDWVENDLIFDKHVTVNLFETTIRVLGGLLSIYHLSADPMYLNKASDLGERLMGAFKSSSSIPYSDVNLKDKAGRPPAWGPDSSLAEVATIQLEFNDLSMSLTNPRYQSAGHNIMLQIFSQS-RTSGLAPIYINADSGSFRASSHITLGARGDSYYEYLLKQWLQGGKEDDQMKEEYLKAMDGVMKLLVKKSKPKGLTYVGELLNGRTFSPKMDHLVCFLPGTLALGYKNGLPESHMTLAKELIETCVQMYKQMGTGLSPEIAYFN-ERNSGHKDIIVKPLDAHNLLRPETVESLHVMYEITGDKKYQEYGWDILHAFNKHCKTPGGGYVSINDVRNAANPRRGEGRDKMESFFLGETLKYLYLLFSDVP-IVPLDKFVFNTEAHPLPI 666
            DN+K  +++S  R W+QLSR+Q+  ++  +A ++    +F+      +K    ++  E+        L  ++ P+ P   P+K+  D E   E   ++     R I+RGPP    +    ++K   +E    ++E       +G  +  +I      ++ E+        A+  T     P +   T      RQ  VI    HAWKGY+  AWGHDEL+P+++++SEWF LGLT++D+LDT+W++ +++E++EAR WV   L F+K V VNLFE+TIR+LGGLLS YHLS D ++L KA D G RLM AF++ S IPYSDVN+      PP W  DS++AEV +IQLEF +LS    + ++Q A   +   I   S +  GL P++IN  SG F      TLGAR DSYYEYLLKQW+QGGK++ Q+ E+Y++A++GV   L++ S+P  LT+VGEL +GR FS KMDHLVCFLPGTLALG  +GLP SHM LA+EL+ETC QM +QM TGLSPEI +FN     G +D+ VKP D HNLLRPETVESL  +Y +TGD+KYQ++GW+IL +F++  + P GGY SIN+V+   +P++ E RDKMESFFLGETLKYL+LLFSD P ++ LD +VFNTEAHPLPI
Sbjct:   61 DNSKSWRRRSCWRKWKQLSRLQRNMILFLLAFLLFCGLLFYINLADHWKALAFRLEEEQKMRPEIAGLKPANPPVLPA--PQKADTDPENLPEISSQKTQ---RHIQRGPPHLQIRPPSQDLKDGTQEEATKRQEAPVDPRPEGDPQRTVISWRGAVIEPEQGTELPSRRAEVPTKPPLPPARTQGTPVHLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGR-FSAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQ---DPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPI 695

The following BLAST results are available for this feature:

BLAST of TCONS_00014034-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014034-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MA1B1	0.000e+0	46.58	Endoplasmic reticulum mannosyl-oligosaccharide 1,2...	[more]

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TCONS_00014034-protein (polypeptide) - C. hemisphaerica