TCONS_00014140-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014140-protein
Unique NameTCONS_00014140-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1054

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014140-protein ID=TCONS_00014140-protein|Name=TCONS_00014140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1054bp
MDLSKLVGQQLLKISQSSETGQHIIEFAEPSDLNQQIVEIDAGKLETSTV
DIGSGKMLEVIKMEATPGHENLILEQEPSTSGIQQASGVIDPAQNVVLMA
TQEASQVITNVQEQEMLPIVDEQQPILKFDSYADFKRTLTEYESQTITKF
ILRNQSKGFQKQVCIHEILENEDKSNDLPLIRWEFCAAKDFLPIPFMGIP
YISIGKQVFQCHQGKDYNVNKKQQYELRKEIMNQATRYQIKSRNKGPTKK
LNCPVLFAVRKMYLFPEFPVENDSKRNRGSVANKIRAKLLKIKKETCTCH
ISTDENDLQSNQQHIPGKLQFLTKLPGTSFHNHDVSKAANFMKIQLKKLG
SKGVEMMSYKKPSEANPYQYDKHIELITALRSTGDLEQLRNAREAMSNVY
PLSEELWLEWFQDELPLAVIPELKEYLLTRFELAVKDYASTKVWHEYCQF
AMNNIESPTDIDRARNVFERAITAAGLHITEGASIWDGYREFEIAILDSY
QQLQDSGDTVGMDAKVEAQIERIATIFKRQISVPLIGMENVFSIYEDWSP
EPISDQTKRAYEKASQKLTLCMEHEEKLHNATEGKLELYKSYIAFEIKSG
DPTRIQCIFERAIKDNCLQHDLWISYTNYLDYKLKIPVVCVPVHERAIRN
CPWVCQLWVNYLRAMERNNEDYSKVKDVFDRSLKGGFPNAEDYLKVWIAM
CDYHRRSITDWTIEDEKVDELRKTFENGITYMNHYFGLEGDKYCTLMREW
AFIEAKYLQNVKRSQELWDTVMKKHARDSSMWLEYVQFLMLFTDTLAIRK
VFQRCVQITLDSPEPICEEFIRFERRFGSLYEVDDAQQKVDVQLKKLKER
REKEALKDLSTQKPSHDNKKKQNKKHEEKKKKKRPSTEKKPPSSNKSTPS
SFQGKESLKRSIHQTLSNEDNYQQPNVKKSKNDYEKPIASSTNNPVPQET
VVAMETIQTAPQPPHAYQTESILQSSTQTIGEPTSTQPSTDIPRDEQQPA
KHLGMGGIMNRLQEMATAPTATDVADKKDEQDVVTSTRYELSRIELENPR
DSPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007912XLOC_007912Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014140TCONS_00014140Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR029309CaRF
IPR011990TPR-like_helical_dom
IPR008847Suf
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0006397mRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0006396 RNA processing
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 833..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..1054
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 559..598
e-value: 820.0
score: 1.4
coord: 635..667
e-value: 36.0
score: 11.4
coord: 384..416
e-value: 510.0
score: 2.9
coord: 600..632
e-value: 0.51
score: 19.4
coord: 459..495
e-value: 0.002
score: 27.4
coord: 793..826
e-value: 98.0
score: 8.2
coord: 670..706
e-value: 17.0
score: 13.7
coord: 759..791
e-value: 24.0
score: 12.6
IPR029309Calcium-responsive transcription factorPFAMPF15299ALS2CR8coord: 182..295
e-value: 5.5E-14
score: 52.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 360..504
e-value: 7.0E-5
score: 22.1
coord: 649..846
e-value: 2.5E-15
score: 56.0
coord: 505..648
e-value: 1.8E-4
score: 20.7
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 364..857
IPR008847Suppressor of forkedPFAMPF05843Sufcoord: 751..977
e-value: 7.5E-7
score: 29.3

Blast
[Close]
BLAST of TCONS_00014140-protein vs. Swiss-Prot (Human)
Match: SART3 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens GN=SART3 PE=1 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 8.694e-127
Identity = 202/500 (40.40%), Postives = 305/500 (61.00%), Query Frame = 0 
Query:  366 NPYQYDKHIELITALRSTGDLEQLRNAREAMSNVYPLSEELWLEWFQDELPLAVIPELKEYLLTRFELAVKDYASTKVWHEYCQFAMNNIESPTDIDRARNVFERAITAAGLHITEGASIWDGYREFEIAILDSYQQLQDSGDTVGMDAKVEAQIERIATIFKRQISVPLIGMENVFSIYEDWSPEPISDQTKRAYEKASQKLTLCMEHEEKLHNATEGKLELYKSYIAFEIKSGDPTRIQCIFERAIKDNCLQHDLWISYTNYLDYKLKIPVVCVPVHERAIRNCPWVCQLWVNYLRAMERNNEDYSKVKDVFDRSLKGGFPNAEDYLKVWIAMCDYHRRSITDWTIEDEKVDELRKTFENGITYMNH----YFGLEGDKYCTLMREWAFIEAKYLQNVKRSQELWDTVM-KKHARDSSMWLEYVQFLMLFTDTLAIRKVFQRCVQITLDSPEPICEEFIRFERRFGSLYEVDDAQQKVDVQLKKLKERREKEALKDLS 860
            N Y Y+ H++LI  LR  G+L ++R AR+ MS ++PL+EELWLEW  DE+ +A     +E++   FE AVKDY    +W EY Q+++  I     +++ R+VFERA+++ GLH+T+G ++W+ YREFE AI+++                  A++E++ ++F+RQ+++PL  ME  F+ YE+WS +PI +   + Y KA Q+L     +EE L  A   +L  Y++YI FE+K GDP RIQ IFERA+ +NCL  DLWI Y+ YLD +LK+  + + VH RAIRNCPW   LW  YL AMER+  D+  +   F+++L  GF  A DY+++W A  DY RR +       ++++ELR  F   + Y+       F   GD  C +M+ WA IEA+   N+++++ELWD++M + +A+ ++MWLEY        DT   RK   R VQ T D PE +CE  +  ER  GSL + D A QK + +L ++ E+R K A K+ +
Sbjct:  108 NVYDYNCHVDLIRLLRLEGELTKVRMARQKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQYSVGGIGQKGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVEA------------------ARLEKVHSLFRRQLAIPLYDMEATFAEYEEWSEDPIPESVIQNYNKALQQLEKYKPYEEALLQAEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEELRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHRAVQCTSDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAA 589
The following BLAST results are available for this feature:
BLAST of TCONS_00014140-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SART38.694e-12740.40Squamous cell carcinoma antigen recognized by T-ce... [more]
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