TCONS_00014185-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014185-protein
Unique NameTCONS_00014185-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length585

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014185-protein ID=TCONS_00014185-protein|Name=TCONS_00014185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MMGKMKFAELARKANARPIQEEQETAEIDQEEKIEEKPRTETFADLPPLD
ENKYVLDEAYFIPISTIKEKAIKPKKPVARKMSGFTRMGSYKSAPLKTTD
ESIPLMDSCSSDTKSTGVSSEGSNEAVEEKEGKSPAKSGNIFARRKITEA
ADPTQLKENPFHRRGVVIDPFQQNNIRSKLKTRLRKIVDERLTVKQIFSR
YVESSTLHGFLYTCSDTYIIRRFLWACLMILGAIYFLVKLREGIIEYFEY
PFSTLSIIDFPDILEFPTISFCLVNGYKHKELNESRLGPLLQNGRFPIHS
SWLDPGYDIPGDELVEVMNNISFTPSDVFEECDWIKRDTAHPSVPPNKCD
AANFTTFFNKQNEKCFMLNSNQKGHPLLKVNHEGLKYGYEGLFDMRTSSA
FLTHPFAGLRVYIHSHHEPAGSGSSFLLSPGFHYYVKMDMHETHNLEPPY
STQCGEIQLKYFDTYNQKACLLEKLTDYVGEKCGCREPFMAENGLPSCSL
KQTILCSLSAKDSFSEYKFREGCPVDCVQHYYRYQITDSRFLHNPPTGVE
AQVLRNENARKGQNSSHMLELVEELSPEELAHYVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007940XLOC_007940Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014185TCONS_00014185Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 201..546
e-value: 4.2E-39
score: 134.6
NoneNo IPR availableGENE3D2.60.470.10coord: 254..496
e-value: 3.0E-32
score: 111.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..138

Blast
[Close]
BLAST of TCONS_00014185-protein vs. Swiss-Prot (Human)
Match: ASIC1 (Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC1 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 2.868e-19
Identity = 100/363 (27.55%), Postives = 157/363 (43.25%), Query Frame = 0 
Query:  201 YVESSTLHGFLYTCS-DTYIIRRFLWACLMILGAIYFLVKL-REGIIEYFEYPFSTLSIIDFPDILEFPTISFCLVNGYKHKELNESRL---GPLLQ--NGRFPIHSSWLDPGYDIPGDELVEVM----NNISFTPS-----DVFEECDWIKRDTAHPS-VPPNKCDAANFTTFFNKQNEKCFMLNSNQKGHPLLKVNHEGLKYGYEGLFDMRTSSAF-------LTHPFAGLRVYIHSHHEPAGSGS-SFLLSPGFHYYVKMDMHETHNLEPPYSTQCGEI----QLKYFDTYNQKACLLEKLTDYVGEKCGCREPFMAENGLPSCSLKQTILCSLSAKDSFSEYKFREGCPVDCVQHYYRY 534
            +  SSTLHG  +  S +   ++R LWA L  LG++  L+ +  E +  YF Y   T         L FP ++ C +N ++  +++++ L   G LL   N R+ I      P   +  ++ +E++    N  SF P      + ++      RD           C A +F   F +   KC+  NS + G P LK    G   G E + D++             T   AG++V IHS  EP       F ++PGF  +V         L PP+ T C  +     L +FD+Y+  AC ++  T Y+ E C CR   M  +  P C+ +Q   C+  A D   E K +E C  +   +  RY
Sbjct:   21 FASSSTLHGLAHIFSYERLSLKRALWA-LCFLGSLAVLLCVCTERVQYYFHYHHVTKLDEVAASQLTFPAVTLCNLNEFRFSQVSKNDLYHAGELLALLNNRYEI------PDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG-KCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRLIYLPPPWGT-CKAVTMDSDLDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDA-PYCTPEQYKECADPALDFLVE-KDQEYCVCEMPCNLTRY 372
The following BLAST results are available for this feature:
BLAST of TCONS_00014185-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC12.868e-1927.55Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC... [more]
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