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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00014290-protein ID=TCONS_00014290-protein|Name=TCONS_00014290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=879bp
MVTRRMERSQSTSFQQVEDWLRGLGLLQYAQSFYDNGYEEIDTCKEITQE
DLDVIGVKSERDRDDIIIAVERLKQNLYFELEAPIIEKPEPVKFDPLVLK
SKLKEELAKRNTQLIEPPYYFPDGKLGDLYPLAIQLADDLGTVFPDVLEG
LEQLRKRQLPAQTYDELNELPEDGKERRSSTVSNQLLDPAEYLNCENPAN
AKNRGHSFSKYDTRVTKSTTDLTKDIHHERSSSAPYTGKYKIKNPGKPDD
GKSSKSRFGSIFRKDTVKSNRGSLKEPHYEFKADELDLSQSELADMMTKV
KSKEMSAEEVLAAVKKRTHSGGEVKSQQPSPNTTLERSDGSSSSTSITPT
NSLGKNKKNKISKNMIKRSPSATFYTSKDDSTPYMIPPENKNNSLERKRS
GSSMGGEDSQPDSTMSSPEMGKHGIISKIRSSMRKKGARNNHDHDHDDTH
SLNQSGGSLSSQENLSISDEHPEKYSPGVKRHEPPPLPPNKPSKPVASNV
YQDPVPIVPISNKPMPPPPRNSTLQKNEGDWEVFSEEGTSPSPSLKIKEY
PQNQEQSNSNRKKSASGAGPLGVGRGLVLDLDAVKLKPTPRVQPRAPKPI
PGTTTEDAKKPETPSTPKAPPRVKKSPGAMTPVTPISIAGIDDIGENMDN
IIAGLDDRLHDIEDNYVDDSQLTNFETPREPVEKPKPVKKPSVTKRPMLP
PKPPARESVTNTSVDKRVATRTFKPLPLKQILWKKLRSEGVQIHETPYTT
NDGHWNVPQALINRYAEELNQSDVEIFNQMEILRKEKCSNARIPHISFSD
SHKDAHKLTDNYSIDQWLIYHGLPMFVSDLQEVNVTSIEQINELKDNDFK
SIGVYHDRHINLLKTAAKQHLEKSSIVFF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 9..76
e-value: 5.9E-9
score: 45.8
coord: 806..873
e-value: 0.81
score: 18.7 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF07647 | SAM_2 | coord: 11..74
e-value: 1.1E-10
score: 41.3 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 12..76
score: 13.954 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 9..73
e-value: 7.9E-14
score: 51.2 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 810..870
e-value: 1.6E-5
score: 24.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 670..713 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 316..631 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 219..273 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 12..78 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 805..873 |
Blast
The following BLAST results are available for this feature:
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