TCONS_00014648-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014648-protein
Unique NameTCONS_00014648-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014648-protein ID=TCONS_00014648-protein|Name=TCONS_00014648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MILSQSAKAVWLGLAAANKMEQFLFVLFIASSFITVHSVELTFELEDNAR
ECFHETIVNKTKCTLEFQVVTGGHYDVDVIVKDPHGKILYDEKKKQYDSV
NFDAEVLGEYEFCFSNEFSSYSHKTIYMDFQDGSKEPPLPIGRGRGMDEG
QYSLTLIESSAVQIHESLNTIIDYQTHHRLREAKSRSLAEYIFERVNYWS
IGQTLIMLGMSLLQVFTLKRLFTEKRDRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008194XLOC_008194Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014648TCONS_00014648Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 40..223
e-value: 1.6E-59
score: 213.7
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 41..222
e-value: 2.7E-44
score: 151.2
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 50..132
score: 18.943
IPR009038GOLD domainSUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 49..130

Blast
[Close]
BLAST of TCONS_00014648-protein vs. Swiss-Prot (Human)
Match: TMED7 (Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 5.720e-74
Identity = 108/187 (57.75%), Postives = 138/187 (73.80%), Query Frame = 0 
Query:   40 ELTFELEDNARECFHETIVNKTKCTLEFQVVTGGHYDVDVIVKDPHGKILYDEKKKQYDSVNFDAEVLGEYEFCFSNEFSSYSHKTIYMDFQDGSKEPPLPIGRGRGMDEGQYSLTLIESSAVQIHESLNTIIDYQTHHRLREAKSRSLAEYIFERVNYWSIGQTLIMLGMSLLQVFTLKRLFTEKR 226
            E+TFEL DNA++CF+E I   TKCTLEFQV+TGGHYDVD  ++DP GK+LY E KKQYDS  F A   G Y+FCFSNEFS+++HKT+Y DFQ G ++PPL     R       +LT +ES+ V IHE+L ++IDYQTH RLREA+ RS AE +  RV YWS+G+ LI+L +S+ QVF LK  F++KR
Sbjct:   36 EITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVG-EDPPLFPSENR-----VSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKR 216
The following BLAST results are available for this feature:
BLAST of TCONS_00014648-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMED75.720e-7457.75Transmembrane emp24 domain-containing protein 7 OS... [more]
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