TCONS_00014743-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014743-protein
Unique Name	TCONS_00014743-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	913

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014743-protein ID=TCONS_00014743-protein|Name=TCONS_00014743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=913bp
YDLSLVMLRRSCIHILLSMLCLPLHFLQLPIQGLCKEKVTGCDNTHSSSQ
VTFISLKGRLTDLLKKALEAETDSENTQLLFAGAMLLMEDTMMVESRNDE
YLKSHPASSTPCILLENVDEIGKGSPKLLHIAKTGPIKHASSSENIKQKG
GDKSPKSDIGRLGKKTDTHTTKGMFVYMTNFLRQGLMFTEKWRGDLNITL
AALECMSGMANYDTRFIDEDAAKRTLTWICNYIEFQAKKPPPSHSKDLHS
IIVAAFQCVYIWLINHPWLVEDKYCLDAVLEVIELGLSGSKSKDKVEDKD
KPSMKADKELKLISFRVRDAAECLLSLLMEQLDLFPNPCGPSTVSTLIDE
EGILHHCGSPEGRKFKYFASDATLIIGLLEDSVTQPKGTSPSVIAILRGP
SGKKACAINLQQFPRNNRSEFVENCKRLAPLPSPAENIPDAASVSQINFP
LEVDRVEKTRTDSSIPDLGSVLNERQKEELLNIEYLMQLQEEEESLASIE
EENARKQQKKTQQQPPQLSTRNEATRLFLSHLGLLTPENLQFEQEHQTQG
LVALKSLDDDLETSLNSLDAFPTRTFDTLLIFFVKKGQDRAKDITNNEIP
TLDNHLFTEFLHSLGWPVETSEHNGWNGDLTTSWKTKDKLTEEQQQYSMK
KMFYYSDLTTELAIHVPALNLQKLKKKERSSSTSSSTSTTPKKQNTSSTP
TTPTTNISSEPMMTSSVESSPQEDGVDGRHHGHHHHRTSSTERKLRKQTT
VEHPILHDVRHRIHSSQSETKIVVAWLQNFNDHQHFPARDLVELNAPQEA
SYSTGYIPTGRVPEREIVIIYIHPLKTGLFRIMVATVFGSSIGGPLVDGM
VCSRRVLGSMVRSTAINICRRRRLEIDSYSPPHVCRKIRIQEMIRKHTIK
QTVPEFYASLLQE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008247	XLOC_008247	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014743	TCONS_00014743	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000331	Rap_GAP_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0051056	regulation of small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005096	GTPase activator activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051056	regulation of small GTPase mediated signal transduction
molecular_function	GO:0005096	GTPase activator activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 473..509
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 673..753
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..166
IPR000331	Rap GTPase activating protein domain	PROSITE	PS50085	RAPGAP	coord: 565..822 score: 13.63
IPR000331	Rap GTPase activating protein domain	SUPERFAMILY	111347	Rap/Ran-GAP	coord: 818..901
IPR000331	Rap GTPase activating protein domain	SUPERFAMILY	111347	Rap/Ran-GAP	coord: 524..668

Blast

[Close]

BLAST of TCONS_00014743-protein vs. Swiss-Prot (Human)
Match: RLGPB (Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 1.993e-135
Identity = 319/944 (33.79%), Postives = 482/944 (51.06%), Query Frame = 0

Query:    8 LRRSCIHILLSMLCLPLHFLQLPIQGLCKEKVTGCDNTHSSSQVTFISLKGRLTDLLKKALEAETDSENTQLLFAGAMLLMEDTMMVESRNDEYLKSHPASSTPCILLENVDEIGKGSPKLLHIAKTGPIKHASSSENIKQKGGDKSPKSDIGRLGKKTDTHTTKGMFVYMTNFLRQGLMFTEKWRGDLNITLAALECMSGMANYDTRFIDEDAAKRTLTWICNYIEFQAKKPPPSHSKDLHSIIVAAFQCVYIWLINHPWLVEDKYCLDAVLEVIELGLSGSKSKDKVEDKDKPSMKADKELKLISFRVRDAAECLLSLLMEQLDLFPNPCGPSTVSTLIDEEGILHHCGSPEGRK--FKYFASDATLIIGLLEDSVTQPKGTS-----PSVIAILRGPSGKKACAINLQQFPRN---NRSEFVENCKRLAPLPSPAENIPDAASVSQINFPLEVDRVEKTRTDSSIPDLGSVLNERQKEELLNIEYLMQLQEEEESLASIEEENARKQQKK------TQQQPPQLSTRNEATRLFLSHLGLLTPENLQFEQEHQTQG-LVALKSLDDDLETSLNSLDAFPTRTFDTLLIFFVKKGQDRAKDITNN--EIPTLDNHLFTEFLHSLGWPVETSEHNGWNGDLTTSWKTK--DKLTEEQQQY------------SMKKMFYYSDLTTELAIHVPALNLQKLKKKERSSSTSSSTSTTPKKQNTSSTPTT---PTTNISSEPMMTSSVESSPQEDGVDGRHHGHHHHRTSSTERKLRKQTTVEHPILHDVRHRIHSSQSETKIVVAWLQNFNDHQHFPARDLV-ELNAPQEASYSTGYIPTGRVPEREIVIIYIHPLKTGLFRIMVATVFGS-SIGGPLVDGMVCSRRVLGSMVRSTAINICRRRRLEIDSYSPPHVCRKIRIQEMIRKHTIKQTVPEFYASLLQE 913
            LRRS I+ILLS+L LP HF  +  + + + K +  D++     +TF+SLK RL ++L  AL+ ETD  NTQ++    + +++D+ ++E+   +                   E+G G   L   ++T     ++S  + +    D    +         +T +  G+ +   + + Q L    +WR D++I+LAALE +SG+A      +D    KR ++ +C YI +Q  +P P HS+DLHS+IVAAFQC+ +WL  HP ++++K CL  VLE++ELG+SGSKSK+   ++ +   K DKE    S RV+DAAE  L+ +M+ L  FP+P GP++  +L++E  ++ +   P   K  F+YF  D ++I+ +LE    QP G       PSV  ++RG SG+ A A  L   PR    N+  FV       P P P  ++    SV    FP EVD++   + D SIPDL  ++ E  +E    +   M  Q   E    +E+++  + QK+      T  +PP  +   +  RLFLSH G L+ E L+     +    L+AL S        +  LD  P R FDT+ IF++K GQ   ++I  N     T+  H F EFL SLGW V+   H GW G ++TSW     D     QQ+               KK+ YY+D  TE+A  VP+        +  + S  S+ S      N    P     P+  +   P  T ++ SS                  SS  RKL +   V  P L            ET++ V W++ ++D ++FP  +L+ E++   E + ++         E+E+ +I+IHPL TGLFRI +    G  ++  PLVDGM+ SRR LG +VR T INICRR+RLE DSYSPPHV RK +I +++ K+  KQ  PEFY SL QE
Sbjct:  610 LRRSSINILLSLLPLPHHFGTVKSEVVLEGKFSNDDSSSYDKPITFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQM------------------EMGGGENNLKSHSRTNSGISSASGGSTEPTTPDSERPAQALLRDYALNTDSAAGLLIRSIHLVTQRL--NSQWRQDMSISLAALELLSGLAKVKV-MVDSGDRKRAISSVCTYIVYQCSRPAPLHSRDLHSMIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKN---NEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLE----QPLGNEQNDFFPSVTVLVRGMSGRLAWAQQLCLLPRGAKANQKLFVPE-----PRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEERHEKLRSGMAQQIAYE--IHLEQQSEEELQKRSFPDPVTDCKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSTIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRTVQPH-FLEFLLSLGWSVDVGRHPGWTGHVSTSWSINCCDDGEGSQQEVISSEDIGASIFNGQKKVLYYADALTEIAFVVPS------PVESLTDSLESNISDQDSDSNMDLMPGILKQPSLTLELFPNHTDNLNSS-------------QRLSPSSRMRKLPQGRPV--PPLG----------PETRVSVVWVERYDDIENFPLSELMTEISTGVETTANSSTSLRSTTLEKEVPVIFIHPLNTGLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQE 1486

The following BLAST results are available for this feature:

BLAST of TCONS_00014743-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014743-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RLGPB	1.993e-135	33.79	Ral GTPase-activating protein subunit beta OS=Homo...	[more]

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TCONS_00014743-protein (polypeptide) - C. hemisphaerica