TCONS_00015259-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015259-protein
Unique NameTCONS_00015259-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length636

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015259-protein ID=TCONS_00015259-protein|Name=TCONS_00015259-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MINTESESGCSSQMSQNGVGLEDQPNPNESVDKDAFTNWLINKISRQSSM
VSRAHGEKVIAYLREEREHGDESVRVKSKFNAQFRFQVKKRKFRLINVVG
LGDILCLPIKDKNKQEHAMLGQHRQVIFKEDMYSVINTAHVNGERHRGYK
GTFSKINATYCNIPREVVSKFVSMCKFCQTAHACFVPGSMKNGTKNKQKK
KDGNFSKRKEIPLEFLTRCQVDILDMQSFPDVEGQFSYVAHFFDHASKYN
VLIPLKRTDSLYVAKKLCRYVFGHFGLPRIIHSNLGRKYVDDLITWILQL
WSTDAQILNGNPRFKKFQQLIQQRQKTVMTLIETIRAKQPDLSNWSSWLP
GIQYSLNTNQFEADSAPSYYSVFTRRPKVYTYAPSSKDIPREEDVIEESI
CQEENAMNEVITVSVNELIQNQTNTIIIPQLAETNPTNDTLNPDKQNDGN
VQIKDANNASSTTLPATDISTLSAIPLSFGEQQYTLINFGGQTLXLSFGE
QQYTLINFGGQTLQIPIVNLGNTSLSLQTITTEESLGQNSTDLESSGVQR
TLQLHDSTTLSLSDNTLSLPPDESTLGLQNQDHSHITLNDGPQNTLVLEN
QETTSLGLENNRNQLTLQNQDHNSLRLXDWKIIELN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008534XLOC_008534Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015259TCONS_00015259Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 598..618
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 207..421
e-value: 6.5E-11
score: 41.7
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 214..358
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 208..377
score: 11.088

Blast
[Close]
BLAST of TCONS_00015259-protein vs. Swiss-Prot (Human)
Match: KRBA2 (KRAB-A domain-containing protein 2 OS=Homo sapiens GN=KRBA2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.190e-16
Identity = 87/368 (23.64%), Postives = 164/368 (44.57%), Query Frame = 0 
Query:   40 LINKISRQSSMVSRAHGEKVIAYLREEREHGDESVRVKSKFNAQFRFQVKKRKFRLINVVGLGDILCLPIKDKNKQEHAMLGQHRQVIFKEDMYSVINTAHVNGERHRGYKGTFSKINATYCNIPREVVSKFVSMCKFCQTAHACFVPGSMKNGTKNKQKKKDGNFSKRKEIPLEFL---TRCQVDILDMQSFPDVEGQFSYVAHFFDHASKYNVLIPLKRTDSLYVAKKLCRYVFGHFGLPRIIHSNLGRKYVDDLITWILQLWSTDAQILNGNPRFKKFQQLIQQRQKTVMTLIETIRAKQPDLSNWSS-WLPGIQY-----------SLNTNQFEADSAPSYYSVFTRRPKVYTYAPSSKDIPRE 392
            L+   S  S + S+    + I  ++E +E G +S R        +R   +  K+ +I+V G   ++        +  H    + R  + KE+++ +++  H++   H G      ++   Y N+ +EV+  ++++CK C   +   VP   K G   K              P+ F    + CQV+ILDMQS  D  G+F ++ ++ DH++K+ +L PL RT   +    +   +F   G P ++ S+ G ++ + ++  + +LW  D +I++G     + Q  ++   + V  +I T        SN S  W  G+++           SL  + FEA        +F  + K   Y   S ++PRE
Sbjct:  119 LVESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSR-------DYR---RAAKYDVISVQGTEKLI--------EATHGERDRIRYYVHKEELFDILHDTHLS-IGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQKNP--VP---KRGLAPK--------------PMTFKDIDSTCQVEILDMQSSAD--GEFKFILYYQDHSTKFIILRPL-RTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWP-DLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQ-----SNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEA--------MFGYKAKFGLY---SSNLPRE 428
The following BLAST results are available for this feature:
BLAST of TCONS_00015259-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KRBA24.190e-1623.64KRAB-A domain-containing protein 2 OS=Homo sapiens... [more]
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