TCONS_00015639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015639-protein
Unique NameTCONS_00015639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1359

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015639-protein ID=TCONS_00015639-protein|Name=TCONS_00015639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1359bp
MEFLQNASRSLNPRKNVNLVSRFLFWYLNPKFWKGFKRKIVKEDVLKISK
DDSVQYLTSQLDSSWKNEVQASERSGRRPNFFHALVKAVWPRMLAITCFL
LILDLSKISQAYLLQRLLEEMAKPLFWEHKEVYYWAGGLSASLILTWMLL
ENSFLKAELLGVNMKSAVLGMLYKKTLTICEPSINTITSGHVISLFSTDS
QKIQEMFGFVYFIVITPVLLGVSTYLLWRELGVSCLAGVGVLIVLVPILS
VAGRFFGYMRVRTVKKTDKRMSLMSEILASMQITKIFTWEDSYSTLVKNV
RREESSQVMNAQLMRAFNNALYGCSPYLVAMATFVTFYHHGDGHLTVAMV
AGSMSIFFAIRMEVTYFFGLGVQGWFEGKSSCKRIQKFLMLKEMKTLRSP
PLPVNTPSSLSVVCDRLYASWNKGDKEPAVKDVSFTANRKNNLVFVVGGV
GTGKTSLLMSLLNELIVHRGSVTINGRVAYSAQQPWVFAGTIRQNILFGK
PFKKEFYENVIMACALAPDLMSFDEGDQTQVGEHGATLSGGQRTRISLAR
AIYSEADVYLLDDPLSAVDNKVARHIFENCILGLLKNKITILVTHQIQFL
EHSTNIVYLQNGASSVEGSLQDLTNRGVNFVSLLHPQTDDGFSDGDSAID
TEDGWHYSLDEETPLRPPSAHDLHGISLNVDNCESARTSKRSFKSAHSSA
DSFETFEGNDDDETIRGAIPYKIYYRYFKEGIGALSTISLFVAVITGQVL
LTLADIWLAEWAFVQERKAQNKTYESKLYIQNNDDNNMYIFVGLSCGAVI
GNVVRVLLFFAALVKCSRRLHNQMFDAVLKAPLYFFETNTSGKILNRFSK
DIYAMDEELPWTFNDMIQLSFLTLAIFIMNCLSVPYLCILLLPIICFFVG
FRHFFVKTSRDLRRLEASSRTPFYNHVISTLDGLSTIRSFALHDVMMEEF
NACADYQTEGWLMYLYSMKWFGQRLNFVVTLFSICAIFAPIVLARYIELD
EGLVGVSLTYVLLLSGMFQWCVQQSAQVDNLMTSVQRAFQYADLHPERDE
GTDKDLRDTWPEYGLLTFESASFSYHKSLPYVLKKIFTAVRPYEKLGIVG
RTGSGKSSVLNMLFRLGNNAGTVRIDGYPIADLCLKTLRQSISVIPQCPV
LFSGTLRKNLDPFSEHVDGDIWEALDDVQMKDAILNCKQKLDTMVTESGN
NWSVGERQLLCLARALLRSCKILFIDEATSNVDNETDALVQETIRRKFKE
CTVITIAHRLNTVMDSDRIMVLDNGKMVELDEPAILLESSNGYFRKLVDQ
AGRNEAHRLVNVAEDSKRLRHLLLLQSKTKYPGSHITVSKTKAEIINYFG
TQVVYETTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008723XLOC_008723Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015639TCONS_00015639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 440..613
e-value: 6.8E-11
score: 52.2
coord: 1092..1276
e-value: 7.1E-10
score: 48.8
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1084..1230
e-value: 4.0E-25
score: 88.8
coord: 431..565
e-value: 4.9E-15
score: 56.1
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 1066..1299
score: 14.266
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 412..636
score: 19.715
NoneNo IPR availableGENE3D3.40.50.300coord: 410..704
e-value: 1.1E-49
score: 169.0
NoneNo IPR availableGENE3D1.20.1560.10coord: 80..394
e-value: 3.1E-40
score: 137.8
NoneNo IPR availableGENE3D1.20.1560.10coord: 705..1049
e-value: 1.4E-57
score: 194.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1050..1302
e-value: 2.4E-59
score: 200.1
NoneNo IPR availableCDDcd03250ABCC_MRP_domain1coord: 417..612
e-value: 2.59391E-86
score: 278.969
NoneNo IPR availableCDDcd03244ABCC_MRP_domain2coord: 1064..1283
e-value: 1.64658E-97
score: 310.965
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 93..360
e-value: 2.7E-18
score: 66.5
coord: 741..1016
e-value: 1.6E-34
score: 119.7
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 94..370
score: 19.552
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 790..1030
score: 29.206
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 78..374
coord: 542..550
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 778..1053
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 538..552
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1056..1296
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 406..637

Blast
BLAST of TCONS_00015639-protein vs. Swiss-Prot (Human)
Match: MRP4 (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 960.288 bits (2481), Expect = 0.000e+0
Identity = 506/1298 (38.98%), Postives = 785/1298 (60.48%), Query Frame = 0
Query:   12 NPRKNVNLVSRFLFWYLNPKFWKGFKRKIVKEDVLKISKDDSVQYLTSQLDSSWKNEVQASERSGRRPNFFHALVKAVWPRMLAITCFLLILDLSKISQAYLLQRLLE--EMAKPL-FWEHKEVYYWAGGLSASLILTWMLLENSFLKAELLGVNMKSAVLGMLYKKTLTICEPSINTITSGHVISLFSTDSQKIQEMFGFVYFIVITPVLLGVSTYLLWRELGVSCLAGVGVLIVLVPILSVAGRFFGYMRVRTVKKTDKRMSLMSEILASMQITKIFTWEDSYSTLVKNVRREESSQVMNAQLMRAFNNALYGCSPYLVAMATFVTFYHHGDGHLTVAMVAGSMSIFFAIRMEVTYFFGLGVQGWFEGKSSCKRIQKFLMLKEMKTLRSPPLPVNTPSSLSVVCDRLYASWNKGDKEPAVKDVSFTANRKNNLVFVVGGVGTGKTSLLMSLLNELIVHRGSVTINGRVAYSAQQPWVFAGTIRQNILFGKPFKKEFYENVIMACALAPDLMSFDEGDQTQVGEHGATLSGGQRTRISLARAIYSEADVYLLDDPLSAVDNKVARHIFENCILGLLKNKITILVTHQIQFLEHSTNIVYLQNGASSVEGSLQDLTNRGVNFVSLLHPQTDDGFSDGDSAIDTEDGWHYSLDEETPLRPPSAHDLHGISLNVDNCESARTSKRSFK-SAHSSADSFETFEGNDDDETIRGAIPYKIYYRYFKEGIGALSTISLFVAVITGQVLLTLADIWLAEWAFVQERKAQNKTYESKLYIQNNDDNNMY--IFVGLSCGAVIGNVVRVLLFFAALVKCSRRLHNQMFDAVLKAPLYFFETNTSGKILNRFSKDIYAMDEELPWTFNDMIQLSFLTLAIFIMNCLSVPYLCILLLPIICFFVGFRHFFVKTSRDLRRLEASSRTPFYNHVISTLDGLSTIRSFALHDVMMEEFNACADYQTEGWLMYLYSMKWFGQRLNFVVTLFSICAIFAPIVLARYIELDEGLVGVSLTYVLLLSGMFQWCVQQSAQVDNLMTSVQRAFQYADLHPERDEGTDKDLRDTWPEYGLLTFESASFSYHKSLPYVLKKIFTAVRPYEKLGIVGRTGSGKSSVLNMLFRLGNNAGTVRIDGYPIADLCLKTLRQSISVIPQCPVLFSGTLRKNLDPFSEHVDGDIWEALDDVQMKDAILNCKQKLDTMVTESGNNWSVGERQLLCLARALLRSCKILFIDEATSNVDNETDALVQETIRRKFKECTVITIAHRLNTVMDSDRIMVLDNGKMVELDEPAILLESSNGYFRKLVDQAGR 1303
            NP ++ NL SR  FW+LNP F  G KR++ ++D+  +  +D  Q+L  +L   W  EV  +E   ++P+   A++K  W   L +  F LI + +K+ Q   L +++   E   P+        Y +A  L+   ++  +L    F   +  G+ ++ A+  M+Y+K L +   ++   T+G +++L S D  K  ++  F++F+   P+     T LLW E+G+SCLAG+ VLI+L+P+ S  G+ F  +R +T   TD R+  M+E++  ++I K++ WE S+S L+ N+R++E S+++ +  +R  N A +  +  ++   TF T+   G   +T + V  +++++ A+R+ VT FF   ++   E   S +RIQ FL+L E+   R+  LP +    + V      A W+K  + P ++ +SFT  R   L+ VVG VG GK+SLL ++L EL    G V+++GR+AY +QQPWVF+GT+R NILFGK ++KE YE VI ACAL  DL   ++GD T +G+ G TLSGGQ+ R++LARA+Y +AD+YLLDDPLSAVD +V+RH+FE CI  +L  KITILVTHQ+Q+L+ ++ I+ L++G    +G+  +    G++F SLL    ++                    E+ P+  P    L   + +  +  S ++S+ S K  A  S D+        ++    G + ++ Y  YF+ G   +  I L +     QV   L D WL+ WA   ++   N T      +    D N Y  I+ GL+   V+  + R LL F  LV  S+ LHN+MF+++LKAP+ FF+ N  G+ILNRFSKDI  +D+ LP TF D IQ     + +  +    +P++ I L+P+   F+  R +F++TSRD++RLE+++R+P ++H+ S+L GL TIR++   +   E F+A  D  +E W ++L + +WF  RL+ +  +F I   F  ++LA+   LD G VG++L+Y L L GMFQWCV+QSA+V+N+M SV+R  +Y DL  E      K     WP  G++ F++ +F Y    P VLK +   ++  EK+GIVGRTG+GKSS+++ LFRL    G + ID     ++ L  LR+ +S+IPQ PVLF+GT+RKNLDPF+EH D ++W AL +VQ+K+ I +   K+DT + ESG+N+SVG+RQL+CLARA+LR  +IL IDEAT+NVD  TD L+Q+ IR KF  CTV+TIAHRLNT++DSD+IMVLD+G++ E DEP +LL++    F K+V Q G+
Sbjct:   11 NPLQDANLCSRVFFWWLNPLFKIGHKRRLEEDDMYSVLPEDRSQHLGEELQGFWDKEVLRAENDAQKPSLTRAIIKCYWKSYLVLGIFTLIEESAKVIQPIFLGKIINYFENYDPMDSVALNTAYAYATVLTFCTLILAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNMAMGKTTTGQIVNLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAVLIILLPLQSCFGKLFSSLRSKTATFTDARIRTMNEVITGIRIIKMYAWEKSFSNLITNLRKKEISKILRSSCLRGMNLASFFSASKIIVFVTFTTYVLLGSV-ITASRVFVAVTLYGAVRLTVTLFFPSAIERVSEAIVSIRRIQTFLLLDEISQ-RNRQLPSDGKKMVHV--QDFTAFWDKASETPTLQGLSFTV-RPGELLAVVGPVGAGKSSLLSAVLGELAPSHGLVSVHGRIAYVSQQPWVFSGTLRSNILFGKKYEKERYEKVIKACALKKDLQLLEDGDLTVIGDRGTTLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVSRHLFELCICQILHEKITILVTHQLQYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKKDNEES-------------------EQPPV--PGTPTLRNRTFSESSVWSQQSSRPSLKDGALESQDTENVPVTLSEENRSEGKVGFQAYKNYFRAGAHWIVFIFLILLNTAAQVAYVLQDWWLSYWA--NKQSMLNVTVNGGGNVTEKLDLNWYLGIYSGLTVATVLFGIARSLLVFYVLVNSSQTLHNKMFESILKAPVLFFDRNPIGRILNRFSKDIGHLDDLLPLTFLDFIQTLLQVVGVVSVAVAVIPWIAIPLVPLGIIFIFLRRYFLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQELFDAHQDLHSEAWFLFLTTSRWFAVRLDAICAMFVIIVAFGSLILAK--TLDAGQVGLALSYALTLMGMFQWCVRQSAEVENMMISVERVIEYTDLEKEAPWEYQKRPPPAWPHEGVIIFDNVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQLGK 1278          
The following BLAST results are available for this feature:
BLAST of TCONS_00015639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP40.000e+038.98Multidrug resistance-associated protein 4 OS=Homo ... [more]
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