TCONS_00015850-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015850-protein
Unique Name	TCONS_00015850-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	771

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015850-protein ID=TCONS_00015850-protein|Name=TCONS_00015850-protein|organism=Clytia hemisphaerica|type=polypeptide|length=771bp
MPLFGNKKGKYECRIVLLDDTEQKHEITSKTLGVDLIENVFKSLKLEEKD
YFGLKYKDYFGEEHWLDPNKAVKKQTHGQKSPYVFYMGVKFYAADPTRLR
EEITRYQFFLQVKKDILFGKISCDDNTAAELCAFAIQSELGDYDSNQHSG
DFISQFRFLPNQSEKIEEMICNAYPKLQGLQPSEAEMKFLERVKWLDMYG
VDLNPVKGQDNMDYLLGLTPTGIVLYKAKNKIGSFIWPKITKLKYKSNCF
LLRATHGRNDDEKEYTFLCQNKDHAKSLWKSCAEHHTFFRIEKANDVPAS
AYNFLFKKNSSSFKFRGRTQAEMERDFDRRPRSQVEFSRTPSQRYKRRST
ASLNESGISRDFGLYSSGPKNTFHQRPRSVNTEYSQNTSDRGHSPKHNRR
SGYSSGGEVEQRKKKYYSGYTSTSDAESIRKNGTKYGSAPNIQHKMYPHH
HPASSNNSTNNDYPQSRYNNDDMQRQHRHQRHSSRESLPTQQHYGHHPQM
NGYGSGNDQRRYRPSGSKSDGEDSSRRRHHHHRSRQSDSEMVAPLDVYHN
TMGVAHNNGDEKKRRHNRRHNHSQQRHHRSTGHMPGYDPNQAELLLELGP
DSGSRDQLSDQLSSTIASDKENVHPQQRSNSSGHWNGHSSPHTPNNQLIN
QYLPSHLLKQQNRPPITQVPNSGGRDGGGGRDGGGGGGYRPQYVEQRRHH
PPGYHPNNYRINRLSLNLSSVAPPPYRHRLPQRSQSFNRLHKPYKPVVTP
NRSGSHKNLKSSSNYNVTTEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008855	XLOC_008855	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015850	TCONS_00015850	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000798	Ez/rad/moesin-like
IPR019749	Band_41_domain
IPR018980	FERM_PH-like_C
IPR014847	FERM-adjacent
IPR011993	PH_dom-like
IPR018979	FERM_N
IPR014352	FERM/acyl-CoA-bd_prot_3-hlx
IPR019748	FERM_central
IPR019747	FERM_CS
IPR000299	FERM_domain
IPR029071	Ubiquitin-rel_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0008092	cytoskeletal protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005856	cytoskeleton

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0008092	cytoskeletal protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000798	Ezrin/radixin/moesin-like	PRINTS	PR00661	ERMFAMILY	coord: 24..43 score: 30.83 coord: 76..95 score: 31.39 coord: 207..227 score: 24.6 coord: 119..140 score: 32.58
IPR019749	Band 4.1 domain	PRINTS	PR00935	BAND41	coord: 110..123 score: 54.61 coord: 44..56 score: 50.0 coord: 184..200 score: 42.03 coord: 123..143 score: 44.25
IPR019749	Band 4.1 domain	SMART	SM00295	B41_5	coord: 7..204 e-value: 4.8E-55 score: 198.9
IPR018980	FERM, C-terminal PH-like domain	SMART	SM01196	FERM_C_3	coord: 208..297 e-value: 6.8E-27 score: 105.3
IPR018980	FERM, C-terminal PH-like domain	PFAM	PF09380	FERM_C	coord: 210..295 e-value: 7.6E-19 score: 67.8
IPR014847	FERM adjacent (FA)	SMART	SM01195	FA_2	coord: 303..350 e-value: 1.6E-4 score: 31.0
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 199..290 e-value: 1.0E-22 score: 80.1
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 197..344
None	No IPR available	GENE3D	3.10.20.90		coord: 10..90 e-value: 1.0E-22 score: 79.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 663..708
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 617..648
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 743..771
None	No IPR available	CDD	cd13186	FERM_C_NBL4_NBL5	coord: 200..290 e-value: 4.81438E-33 score: 122.392
IPR018979	FERM, N-terminal	PFAM	PF09379	FERM_N	coord: 15..75 e-value: 1.6E-14 score: 53.4
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	1.20.80.10		coord: 91..196 e-value: 2.0E-31 score: 108.0
IPR019748	FERM central domain	PFAM	PF00373	FERM_M	coord: 96..202 e-value: 1.1E-18 score: 67.6
IPR019748	FERM central domain	CDD	cd14473	FERM_B-lobe	coord: 104..196 e-value: 2.96535E-30 score: 114.651
IPR019748	FERM central domain	SUPERFAMILY	47031	Second domain of FERM	coord: 95..199
IPR019747	FERM conserved site	PROSITE	PS00661	FERM_2	coord: 174..203
IPR000299	FERM domain	PROSITE	PS50057	FERM_3	coord: 11..293 score: 80.274
IPR029071	Ubiquitin-related domain	SUPERFAMILY	54236	Ubiquitin-like	coord: 12..93

Blast

[Close]

BLAST of TCONS_00015850-protein vs. Swiss-Prot (Human)
Match: E41LA (Band 4.1-like protein 4A OS=Homo sapiens GN=EPB41L4A PE=1 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.621e-90
Identity = 158/376 (42.02%), Postives = 227/376 (60.37%), Query Frame = 0

Query:    1 MPLFGNKKGKYECRIVLLDD-----TEQKHEITSKTLGVDLIENVFKSLKLEEKDYFGLKYKDYFGEEHWLDPNKAVK--KQTHGQKSPYVFYMGVKFYAADPTRLREEITRYQFFLQVKKDILFGKISCDDNTAAELCAFAIQSELGDYDSNQHSGDFISQFRFLPNQSEKIEEMICNAYPKLQGLQPSEAEMKFLERVKWLDMYGVDLNPVKGQDNMDYLLGLTPTGIVLYKAKNKIGSFIWPKITKLKYKSNCFLLRATHGRNDDEKEYTFLCQNKDHAKSLWKSCAEHHTFFRIEKANDVPASAYNFLFKKNSS------SFKFRGRTQAEMERDFD-RRPRSQVEFSRTPSQRYKRR--STASLNESGISR 360
            M  F     ++ C ++LLD+     T Q+  I   T G  ++++VF  + L E DYFGL+Y D   + +WLDP K +   K+      PY  Y G+KFYA DP +L+EEITRYQFFLQVK+D+L G++ C  NTAA+L A+AIQSELGDYD  +H+  ++S++RF+P+Q E++EE I   +  L G  PSEAE+ +L   K L+MYGVDL+PV G++  +Y LGLTP G+V+YK K ++G + WP+ITK+ +K   F LR   G++ +E  + F  ++K   K LWK   EHHTFFR+      P +  N L +K S         ++ GRT  +M RD   + PR     +R+ S+ Y +R   T     + ISR
Sbjct:    1 MGCFCAVPEEFYCEVLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTYWLDPAKTLAEHKELINTGPPYTLYFGIKFYAEDPCKLKEEITRYQFFLQVKQDVLQGRLPCPVNTAAQLGAYAIQSELGDYDPYKHTAGYVSEYRFVPDQKEELEEAIERIHKTLMGQIPSEAELNYLRTAKSLEMYGVDLHPVYGENKSEYFLGLTPVGVVVYKNKKQVGKYFWPRITKVHFKETQFELRVL-GKDCNETSFFFEARSKTACKHLWKCSVEHHTFFRM------PENESNSLSRKLSKFGSIRYKHRYSGRTALQMSRDLSIQLPRPDQNVTRSRSKTYPKRIAQTQPAESNSISR 369

The following BLAST results are available for this feature:

BLAST of TCONS_00015850-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015850-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
E41LA	3.621e-90	42.02	Band 4.1-like protein 4A OS=Homo sapiens GN=EPB41L...	[more]

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TCONS_00015850-protein (polypeptide) - C. hemisphaerica